Genome Details
Selected Rep_genome_ID: Rep_274
Total Genomes Found: 12
Total Genomes Found: 12
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Sodaliphilus
Species
Sodaliphilus sp004557565
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| CGMR050807 | 2,707,307 | 94.91% | 0.13% | China | Asia | CGMR |
| GCA_021624105.1_ASM2162410v1_genomic | 2,841,279 | 94.53% | 0.16% | NA | Africa | H3AfricaPhase1 |
| GCA_021626445.1_ASM2162644v1_genomic | 2,905,613 | 94.15% | 0.13% | NA | Africa | H3AfricaPhase1 |
| GCA_021627905.1_ASM2162790v1_genomic | 2,900,267 | 96.42% | 2.01% | NA | Africa | H3AfricaPhase1 |
| GCA_021636435.1_ASM2163643v1_genomic | 2,885,098 | 94.15% | 0.13% | NA | Africa | H3AfricaPhase1 |
| GCA_021637785.1_ASM2163778v1_genomic | 2,784,152 | 95.66% | 1.7% | NA | Africa | H3AfricaPhase1 |
| GCA_021638535.1_ASM2163853v1_genomic | 2,783,133 | 96.04% | 0.13% | NA | Africa | H3AfricaPhase1 |
| HRGMv2_0248 | 3,056,795 | 96.41% | 0.125% | United Kingdom | Europe | HRGM |
| MGYG000004474 | 2,861,939 | 96.42% | 0.13% | Israel | Asia | UHGG |
| REFINED_METABAT215_TOP10_CONTIGS_1500_ASSEMBLY_K77_MERGED__Hadza_MoBio_hadza-E-H_B_9_1942.181 | 3,026,257 | 96.42% | 0.13% | NA | Africa | Hadza |
| Rep_274 | 3,144,948 | 96.4151% | 0.251572% | NA | NA | WIS |
| SW094_maxbin.032 | 3,070,006 | 97.17% | 0.25% | NA | Africa | H3AfricaPhase2 |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| Rep_274_CGC23 | CGCFAM_00002 | Yes | 11 | 6 | |
| Rep_274_CGC1 | CGCFAM_00034 | Yes | 5 | 4 | |
| Rep_274_CGC2 | CGCFAM_00050 | Yes | 9 | 4 | |
| Rep_274_CGC6 | CGCFAM_00186 | Yes | 4 | 1 | |
| Rep_274_CGC18 | CGCFAM_00188 | Yes | 5 | 3 | |
| Rep_274_CGC15 | CGCFAM_00288 | Yes | 5 | 2 | |
| Rep_274_CGC10 | CGCFAM_00367 | Yes | 3 | 1 | |
| Rep_274_CGC24 | CGCFAM_01257 | Yes | 10 | 3 | |
| Rep_274_CGC5 | CGCFAM_02826 | Yes | 4 | 1 | |
| Rep_274_CGC13 | CGCFAM_03553 | Yes | 3 | 1 | |
| Rep_274_CGC25 | CGCFAM_05082 | Yes | 3 | 1 |
Top CAZyme Families