Cluster: Rep_274_CGC23
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 6
- Substrate:
- Genome ID: Rep_274
- CGC Family ID: CGCFAM_00002
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_274_c_0 | Rep_274_c_0_1573 | 1888522 | 1889268 | - | 9.B.18.1.2 |
| CAZyme | Rep_274_c_0 | Rep_274_c_0_1574 | 1889312 | 1890439 | - | GT4 |
| CAZyme | Rep_274_c_0 | Rep_274_c_0_1575 | 1890432 | 1891490 | - | GT4 |
| NULL(UNKNOWN) | Rep_274_c_0 | Rep_274_c_0_1576 | 1891487 | 1892035 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_274_c_0 | Rep_274_c_0_1577 | 1892032 | 1892937 | - | GT2 |
| pfam | Rep_274_c_0 | Rep_274_c_0_1578 | 1892951 | 1894066 | - | EpsG |
| CAZyme | Rep_274_c_0 | Rep_274_c_0_1579 | 1894078 | 1894755 | - | GT32 |
| pfam | Rep_274_c_0 | Rep_274_c_0_1580 | 1894890 | 1895261 | - | PDDEXK_3 |
| CAZyme | Rep_274_c_0 | Rep_274_c_0_1581 | 1895363 | 1896571 | - | GT4 |
| pfam | Rep_274_c_0 | Rep_274_c_0_1582 | 1896568 | 1897659 | - | PS_pyruv_trans |
| CAZyme | Rep_274_c_0 | Rep_274_c_0_1583 | 1897649 | 1898806 | - | GT4 |
Gene ID: Rep_274_c_0_1573
Type: TC
Location: 1888522 - 1889268 (-)
Type: TC
Location: 1888522 - 1889268 (-)
Gene ID: Rep_274_c_0_1574
Type: CAZyme
Location: 1889312 - 1890439 (-)
Type: CAZyme
Location: 1889312 - 1890439 (-)
Gene ID: Rep_274_c_0_1575
Type: CAZyme
Location: 1890432 - 1891490 (-)
Type: CAZyme
Location: 1890432 - 1891490 (-)
Gene ID: Rep_274_c_0_1576
Type:
Location: 1891487 - 1892035 (-)
Type:
Location: 1891487 - 1892035 (-)
Gene ID: Rep_274_c_0_1577
Type: CAZyme
Location: 1892032 - 1892937 (-)
Type: CAZyme
Location: 1892032 - 1892937 (-)
Gene ID: Rep_274_c_0_1578
Type: pfam
Location: 1892951 - 1894066 (-)
Type: pfam
Location: 1892951 - 1894066 (-)
Gene ID: Rep_274_c_0_1579
Type: CAZyme
Location: 1894078 - 1894755 (-)
Type: CAZyme
Location: 1894078 - 1894755 (-)
Gene ID: Rep_274_c_0_1580
Type: pfam
Location: 1894890 - 1895261 (-)
Type: pfam
Location: 1894890 - 1895261 (-)
Gene ID: Rep_274_c_0_1581
Type: CAZyme
Location: 1895363 - 1896571 (-)
Type: CAZyme
Location: 1895363 - 1896571 (-)
Gene ID: Rep_274_c_0_1582
Type: pfam
Location: 1896568 - 1897659 (-)
Type: pfam
Location: 1896568 - 1897659 (-)
Gene ID: Rep_274_c_0_1583
Type: CAZyme
Location: 1897649 - 1898806 (-)
Type: CAZyme
Location: 1897649 - 1898806 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Sodaliphilus
Species
Sodaliphilus sp004557565
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.