Cluster: Rep_274_CGC18
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_274
- CGC Family ID: CGCFAM_00188
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_274_c_0 | Rep_274_c_0_1286 | 1567434 | 1568780 | - | 3.A.5.1.1 |
| pfam | Rep_274_c_0 | Rep_274_c_0_1287 | 1569290 | 1569760 | + | LMWPc |
| CAZyme | Rep_274_c_0 | Rep_274_c_0_1288 | 1569936 | 1572386 | + | GH20 |
| CAZyme | Rep_274_c_0 | Rep_274_c_0_1289 | 1572540 | 1573529 | + | GT2 |
| CAZyme | Rep_274_c_0 | Rep_274_c_0_1290 | 1573543 | 1574502 | + | GT2 |
Gene ID: Rep_274_c_0_1286
Type: TC
Location: 1567434 - 1568780 (-)
Type: TC
Location: 1567434 - 1568780 (-)
Gene ID: Rep_274_c_0_1287
Type: pfam
Location: 1569290 - 1569760 (+)
Type: pfam
Location: 1569290 - 1569760 (+)
Gene ID: Rep_274_c_0_1288
Type: CAZyme
Location: 1569936 - 1572386 (+)
Type: CAZyme
Location: 1569936 - 1572386 (+)
Gene ID: Rep_274_c_0_1289
Type: CAZyme
Location: 1572540 - 1573529 (+)
Type: CAZyme
Location: 1572540 - 1573529 (+)
Gene ID: Rep_274_c_0_1290
Type: CAZyme
Location: 1573543 - 1574502 (+)
Type: CAZyme
Location: 1573543 - 1574502 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Sodaliphilus
Species
Sodaliphilus sp004557565
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.