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Genome Details

Selected Rep_genome_ID: Rep_254
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
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Phylum
Bacteroidota
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Class
Bacteroidia
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Order
Bacteroidales
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Family
Bacteroidaceae
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Genus
Prevotella
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Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
Rep_254 3,519,672 92.8088% 3.29392% NA NA WIS
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
Rep_254_CGC16 CGCFAM_00001 Yes 7 3 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
Rep_254_CGC27 CGCFAM_00001 Yes 5 3 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
Rep_254_CGC30 CGCFAM_00001 Yes 6 1 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
Rep_254_CGC12 CGCFAM_00002 Yes 3 2
Rep_254_CGC5 CGCFAM_00031 Yes 6 1 pectin/galactan
Rep_254_CGC9 CGCFAM_00032 Yes 4 1
Rep_254_CGC2 CGCFAM_00048 Yes 6 2
Rep_254_CGC20 CGCFAM_00080 Yes 4 1
Rep_254_CGC35 CGCFAM_00108 Yes 6 2 pectin
Rep_254_CGC43 CGCFAM_00116 Yes 21 10 xylan/beta-glucan
Rep_254_CGC24 CGCFAM_00136 Yes 10 4 pectin
Rep_254_CGC23 CGCFAM_00148 Yes 8 2
Rep_254_CGC36 CGCFAM_00192 Yes 5 1
Rep_254_CGC40 CGCFAM_00721 Yes 3 2
Rep_254_CGC48 CGCFAM_01072 Yes 4 2
Rep_254_CGC7 CGCFAM_01379 Yes 5 1
Rep_254_CGC37 CGCFAM_01944 Yes 3 2
Rep_254_CGC19 CGCFAM_02370 Yes 3 1
Rep_254_CGC44 CGCFAM_03046 Yes 4 2
Rep_254_CGC8 CGCFAM_03914 Yes 5 1
Rep_254_CGC21 CGCFAM_03983 Yes 5 1
Rep_254_CGC14 CGCFAM_05335 Yes 13 6
Rep_254_CGC39 CGCFAM_11251 Yes 8 1
Rep_254_CGC26 CGCFAM_11252 Yes 5 2
Rep_254_CGC42 CGCFAM_11256 Yes 4 1
Top CAZyme Families