Genome Details
Selected Rep_genome_ID: Rep_201
Total Genomes Found: 7
Total Genomes Found: 7
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp900548745
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| AG003_90_sub | 3,553,674 | 98.08% | 0.19% | NA | Africa | H3AfricaPhase2 |
| CGMR077727 | 3,161,580 | 96.3% | 0.19% | China | Asia | CGMR |
| GCF_021640105.1_ASM2164010v1_genomic | 3,145,057 | 94.09% | 0.93% | NA | Africa | H3AfricaPhase1 |
| HRGMv2_0404 | 3,472,404 | 99.62% | 0.308% | United Kingdom | Europe | HRGM |
| MGYG000004491 | 3,066,074 | 95.55% | 0.42% | Israel | Asia | UHGG |
| REFINED_METABAT215_TOP10_CONTIGS_1500_ASSEMBLY_K77_MERGED__Hadza_MoBio_hadza-I-L_F_5_2654.144 | 3,489,805 | 99.51% | 0.19% | NA | Africa | Hadza |
| Rep_201 | 3,844,593 | 99.6296% | 0.185185% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| Rep_201_CGC9 | CGCFAM_00034 | Yes | 10 | 5 | |
| Rep_201_CGC27 | CGCFAM_00048 | Yes | 9 | 3 | |
| Rep_201_CGC11 | CGCFAM_00136 | Yes | 5 | 2 | pectin |
| Rep_201_CGC8 | CGCFAM_00192 | Yes | 6 | 2 | |
| Rep_201_CGC31 | CGCFAM_00306 | Yes | 10 | 9 | |
| Rep_201_CGC18 | CGCFAM_00388 | Yes | 4 | 1 | |
| Rep_201_CGC23 | CGCFAM_00654 | Yes | 6 | 3 | |
| Rep_201_CGC10 | CGCFAM_01729 | Yes | 7 | 2 | |
| Rep_201_CGC16 | CGCFAM_03102 | Yes | 7 | 2 | |
| Rep_201_CGC32 | CGCFAM_04962 | Yes | 11 | 5 | |
| Rep_201_CGC17 | CGCFAM_06126 | Yes | 4 | 1 | |
| Rep_201_CGC33 | CGCFAM_07527 | Yes | 7 | 3 | |
| Rep_201_CGC28 | CGCFAM_07528 | Yes | 5 | 2 | |
| Rep_201_CGC12 | CGCFAM_11244 | Yes | 5 | 1 | |
| Rep_201_CGC35 | CGCFAM_11245 | Yes | 6 | 1 |
Top CAZyme Families