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Cluster: Rep_201_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_201_c_0 Rep_201_c_0_846 929699 931408 - 8.A.46.1.1
TC Rep_201_c_0 Rep_201_c_0_847 931573 934590 - 1.B.14.6.1
TF Rep_201_c_0 Rep_201_c_0_848 934916 935941 + LacI
TC Rep_201_c_0 Rep_201_c_0_849 936111 937415 + 2.A.2.6.2
CAZyme Rep_201_c_0 Rep_201_c_0_850 937434 940112 + GH77
CAZyme Rep_201_c_0 Rep_201_c_0_851 940241 942382 + GH97
CAZyme Rep_201_c_0 Rep_201_c_0_852 942417 944327 + GH13_14
CAZyme Rep_201_c_0 Rep_201_c_0_853 944357 946279 + GH13_46
CAZyme Rep_201_c_0 Rep_201_c_0_854 946381 948429 + GH13_6
TC Rep_201_c_0 Rep_201_c_0_855 948850 950301 + 2.A.102.4.10
Gene ID: Rep_201_c_0_846
Type: TC
Location: 929699 - 931408 (-)
Gene ID: Rep_201_c_0_847
Type: TC
Location: 931573 - 934590 (-)
Gene ID: Rep_201_c_0_848
Type: TF
Location: 934916 - 935941 (+)
Gene ID: Rep_201_c_0_849
Type: TC
Location: 936111 - 937415 (+)
Gene ID: Rep_201_c_0_850
Type: CAZyme
Location: 937434 - 940112 (+)
Gene ID: Rep_201_c_0_851
Type: CAZyme
Location: 940241 - 942382 (+)
Gene ID: Rep_201_c_0_852
Type: CAZyme
Location: 942417 - 944327 (+)
Gene ID: Rep_201_c_0_853
Type: CAZyme
Location: 944357 - 946279 (+)
Gene ID: Rep_201_c_0_854
Type: CAZyme
Location: 946381 - 948429 (+)
Gene ID: Rep_201_c_0_855
Type: TC
Location: 948850 - 950301 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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