Cluster: Rep_201_CGC23
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_201
- CGC Family ID: CGCFAM_00654
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_201_c_0 | Rep_201_c_0_2189 | 2552861 | 2554954 | + | PL1 |
| peptidase | Rep_201_c_0 | Rep_201_c_0_2190 | 2554968 | 2555801 | - | S09.UPC |
| peptidase | Rep_201_c_0 | Rep_201_c_0_2191 | 2555814 | 2556668 | - | C82.UPA |
| TC | Rep_201_c_0 | Rep_201_c_0_2192 | 2556896 | 2558245 | + | 2.A.66.1.33 |
| CAZyme | Rep_201_c_0 | Rep_201_c_0_2193 | 2558252 | 2559055 | - | GT2 |
| CAZyme | Rep_201_c_0 | Rep_201_c_0_2194 | 2559052 | 2560326 | - | GT4 |
Gene ID: Rep_201_c_0_2189
Type: CAZyme
Location: 2552861 - 2554954 (+)
Type: CAZyme
Location: 2552861 - 2554954 (+)
Gene ID: Rep_201_c_0_2190
Type: peptidase
Location: 2554968 - 2555801 (-)
Type: peptidase
Location: 2554968 - 2555801 (-)
Gene ID: Rep_201_c_0_2191
Type: peptidase
Location: 2555814 - 2556668 (-)
Type: peptidase
Location: 2555814 - 2556668 (-)
Gene ID: Rep_201_c_0_2192
Type: TC
Location: 2556896 - 2558245 (+)
Type: TC
Location: 2556896 - 2558245 (+)
Gene ID: Rep_201_c_0_2193
Type: CAZyme
Location: 2558252 - 2559055 (-)
Type: CAZyme
Location: 2558252 - 2559055 (-)
Gene ID: Rep_201_c_0_2194
Type: CAZyme
Location: 2559052 - 2560326 (-)
Type: CAZyme
Location: 2559052 - 2560326 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp900548745
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.