Genome Details
Selected Rep_genome_ID: Rep_142
Total Genomes Found: 3
Total Genomes Found: 3
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella bivia
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| AG187_7 | 1,931,997 | 92.31% | 0.7% | NA | Africa | H3AfricaPhase2 |
| CGMR026865 | 2,001,803 | 97.3% | 0% | China | Asia | CGMR |
| Rep_142 | 2,286,602 | 99.6622% | 0% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| Rep_142_CGC7 | CGCFAM_00013 | Yes | 5 | 1 | |
| Rep_142_CGC21 | CGCFAM_00016 | Yes | 8 | 3 | host glycan |
| Rep_142_CGC6 | CGCFAM_00016 | Yes | 6 | 1 | host glycan |
| Rep_142_CGC5 | CGCFAM_00180 | Yes | 11 | 5 | |
| Rep_142_CGC14 | CGCFAM_01329 | Yes | 3 | 1 | |
| Rep_142_CGC12 | CGCFAM_08448 | Yes | 4 | 1 | |
| Rep_142_CGC13 | CGCFAM_09093 | Yes | 6 | 1 |
Top CAZyme Families