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Cluster: Rep_142_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_142_c_70 Rep_142_c_70_77 82794 84425 - GH20
pfam Rep_142_c_70 Rep_142_c_70_78 84471 85757 - MFS_1 | MFS_1
CAZyme Rep_142_c_70 Rep_142_c_70_79 85867 87372 + GH29
NULL(UNKNOWN) Rep_142_c_70 Rep_142_c_70_80 87595 88608 - NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_142_c_70 Rep_142_c_70_81 88634 89809 - BT_3987-like_N | Laminin_G_3
CAZyme Rep_142_c_70 Rep_142_c_70_82 89830 90948 - GH18
TC Rep_142_c_70 Rep_142_c_70_83 90985 92535 - 8.A.46.2.2
TC Rep_142_c_70 Rep_142_c_70_84 92561 95674 - 1.B.14.6.13
Gene ID: Rep_142_c_70_77
Type: CAZyme
Location: 82794 - 84425 (-)
Gene ID: Rep_142_c_70_78
Type: pfam
Location: 84471 - 85757 (-)
Gene ID: Rep_142_c_70_79
Type: CAZyme
Location: 85867 - 87372 (+)
Gene ID: Rep_142_c_70_80
Type:
Location: 87595 - 88608 (-)
Gene ID: Rep_142_c_70_81
Type: pfam
Location: 88634 - 89809 (-)
Gene ID: Rep_142_c_70_82
Type: CAZyme
Location: 89830 - 90948 (-)
Gene ID: Rep_142_c_70_83
Type: TC
Location: 90985 - 92535 (-)
Gene ID: Rep_142_c_70_84
Type: TC
Location: 92561 - 95674 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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