Cluster: Rep_142_CGC7
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_142
- CGC Family ID: CGCFAM_00013
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_142_c_20 | Rep_142_c_20_123 | 151942 | 153045 | - | GT28 |
| TC | Rep_142_c_20 | Rep_142_c_20_124 | 153246 | 154544 | - | 2.A.103.1.2 |
| NULL(UNKNOWN) | Rep_142_c_20 | Rep_142_c_20_125 | 154601 | 154729 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_142_c_20 | Rep_142_c_20_126 | 154791 | 156122 | - | Mur_ligase_C | Mur_ligase_M | MurD_N | MurD-like_N |
| TC | Rep_142_c_20 | Rep_142_c_20_127 | 156142 | 157413 | - | 9.B.146.1.3 |
Gene ID: Rep_142_c_20_123
Type: CAZyme
Location: 151942 - 153045 (-)
Type: CAZyme
Location: 151942 - 153045 (-)
Gene ID: Rep_142_c_20_124
Type: TC
Location: 153246 - 154544 (-)
Type: TC
Location: 153246 - 154544 (-)
Gene ID: Rep_142_c_20_125
Type:
Location: 154601 - 154729 (-)
Type:
Location: 154601 - 154729 (-)
Gene ID: Rep_142_c_20_126
Type: pfam
Location: 154791 - 156122 (-)
Type: pfam
Location: 154791 - 156122 (-)
Gene ID: Rep_142_c_20_127
Type: TC
Location: 156142 - 157413 (-)
Type: TC
Location: 156142 - 157413 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella bivia
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.