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Cluster: Rep_142_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_142_c_5 Rep_142_c_5_84 100025 101899 + 3.A.1.106.2
sulfatase Rep_142_c_5 Rep_142_c_5_85 101909 103888 + S1_21
CAZyme Rep_142_c_5 Rep_142_c_5_86 103950 105095 - GT4
pfam Rep_142_c_5 Rep_142_c_5_87 105215 106174 + Lip_A_acyltrans
CAZyme Rep_142_c_5 Rep_142_c_5_88 106180 106992 + GT11
CAZyme Rep_142_c_5 Rep_142_c_5_89 107099 108286 - GT4
NULL(UNKNOWN) Rep_142_c_5 Rep_142_c_5_90 108329 108511 + NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_142_c_5 Rep_142_c_5_91 108649 110328 + Sulfatase
CAZyme Rep_142_c_5 Rep_142_c_5_92 110468 111652 + GT4
pfam Rep_142_c_5 Rep_142_c_5_93 111677 112849 + GT87
CAZyme Rep_142_c_5 Rep_142_c_5_94 112883 113836 - GT2
Gene ID: Rep_142_c_5_84
Type: TC
Location: 100025 - 101899 (+)
Gene ID: Rep_142_c_5_85
Type: sulfatase
Location: 101909 - 103888 (+)
Gene ID: Rep_142_c_5_86
Type: CAZyme
Location: 103950 - 105095 (-)
Gene ID: Rep_142_c_5_87
Type: pfam
Location: 105215 - 106174 (+)
Gene ID: Rep_142_c_5_88
Type: CAZyme
Location: 106180 - 106992 (+)
Gene ID: Rep_142_c_5_89
Type: CAZyme
Location: 107099 - 108286 (-)
Gene ID: Rep_142_c_5_90
Type:
Location: 108329 - 108511 (+)
Gene ID: Rep_142_c_5_91
Type: pfam
Location: 108649 - 110328 (+)
Gene ID: Rep_142_c_5_92
Type: CAZyme
Location: 110468 - 111652 (+)
Gene ID: Rep_142_c_5_93
Type: pfam
Location: 111677 - 112849 (+)
Gene ID: Rep_142_c_5_94
Type: CAZyme
Location: 112883 - 113836 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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