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Genome Details

Selected Rep_genome_ID: MGYG000003355
Total Genomes Found: 2
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
Lachnoclostridium
→
Species
Lachnoclostridium phytofermentans_A
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
CGMR039452 4,988,775 97.27% 4.47% China Asia CGMR
MGYG000003355 5,194,070 96.76% 3.47% China Asia UHGG
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
MGYG000003355_CGC15 CGCFAM_00021 Yes 8 4
MGYG000003355_CGC1 CGCFAM_00041 Yes 3 1
MGYG000003355_CGC30 CGCFAM_00053 Yes 5 2
MGYG000003355_CGC11 CGCFAM_00121 Yes 13 5
MGYG000003355_CGC48 CGCFAM_00127 Yes 4 1
MGYG000003355_CGC50 CGCFAM_00172 Yes 4 1
MGYG000003355_CGC56 CGCFAM_00215 Yes 5 3 alpha-glucan
MGYG000003355_CGC29 CGCFAM_00281 Yes 10 6
MGYG000003355_CGC9 CGCFAM_00283 Yes 20 5
MGYG000003355_CGC43 CGCFAM_00314 Yes 10 4
MGYG000003355_CGC61 CGCFAM_00462 Yes 7 3
MGYG000003355_CGC23 CGCFAM_00498 Yes 7 1
MGYG000003355_CGC49 CGCFAM_00806 Yes 8 4
MGYG000003355_CGC54 CGCFAM_01038 Yes 5 2
MGYG000003355_CGC42 CGCFAM_01088 Yes 3 1
MGYG000003355_CGC36 CGCFAM_01215 Yes 3 1
MGYG000003355_CGC10 CGCFAM_01546 Yes 4 1
MGYG000003355_CGC21 CGCFAM_01989 Yes 3 1
MGYG000003355_CGC22 CGCFAM_02656 Yes 7 3
MGYG000003355_CGC6 CGCFAM_02836 Yes 6 2
MGYG000003355_CGC51 CGCFAM_02841 Yes 3 1
MGYG000003355_CGC2 CGCFAM_03058 Yes 16 3
MGYG000003355_CGC35 CGCFAM_03286 Yes 4 1
MGYG000003355_CGC33 CGCFAM_03514 Yes 4 1
MGYG000003355_CGC18 CGCFAM_03551 Yes 6 1
Top CAZyme Families