Cluster: MGYG000003355_CGC11
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 5
- Substrate:
- Genome ID: MGYG000003355
- CGC Family ID: CGCFAM_00121
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003355_36 | MGYG000003355_36_36 | 46169 | 53677 | + | CE8 | PL9_1 |
| CAZyme | MGYG000003355_36 | MGYG000003355_36_37 | 54076 | 61584 | + | CE8 | PL9_1 |
| CAZyme | MGYG000003355_36 | MGYG000003355_36_38 | 61816 | 62865 | + | GT2 |
| NULL(UNKNOWN) | MGYG000003355_36 | MGYG000003355_36_39 | 63139 | 63450 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | MGYG000003355_36 | MGYG000003355_36_40 | 64076 | 64855 | - | HTH_AraC |
| TC | MGYG000003355_36 | MGYG000003355_36_41 | 64936 | 65811 | - | 3.A.1.1.45 |
| TC | MGYG000003355_36 | MGYG000003355_36_42 | 65823 | 66749 | - | 3.A.1.1.18 |
| STP | MGYG000003355_36 | MGYG000003355_36_43 | 66821 | 68173 | - | SBP_bac_1 |
| TC | MGYG000003355_36 | MGYG000003355_36_44 | 68265 | 70019 | - | 8.A.59.2.1 |
| pfam | MGYG000003355_36 | MGYG000003355_36_45 | 70424 | 71848 | - | PGM_PMM_IV | PGM_PMM_I | PGM_PMM_II | PGM_PMM_III |
| CAZyme | MGYG000003355_36 | MGYG000003355_36_46 | 71884 | 74277 | - | GH94 |
| pfam | MGYG000003355_36 | MGYG000003355_36_47 | 74652 | 76319 | - | PEPCK_ATP |
| CAZyme | MGYG000003355_36 | MGYG000003355_36_48 | 76772 | 78337 | + | CE20 | CE20 |
Gene ID: MGYG000003355_36_36
Type: CAZyme
Location: 46169 - 53677 (+)
Type: CAZyme
Location: 46169 - 53677 (+)
Gene ID: MGYG000003355_36_37
Type: CAZyme
Location: 54076 - 61584 (+)
Type: CAZyme
Location: 54076 - 61584 (+)
Gene ID: MGYG000003355_36_38
Type: CAZyme
Location: 61816 - 62865 (+)
Type: CAZyme
Location: 61816 - 62865 (+)
Gene ID: MGYG000003355_36_39
Type:
Location: 63139 - 63450 (-)
Type:
Location: 63139 - 63450 (-)
Gene ID: MGYG000003355_36_40
Type: TF
Location: 64076 - 64855 (-)
Type: TF
Location: 64076 - 64855 (-)
Gene ID: MGYG000003355_36_41
Type: TC
Location: 64936 - 65811 (-)
Type: TC
Location: 64936 - 65811 (-)
Gene ID: MGYG000003355_36_42
Type: TC
Location: 65823 - 66749 (-)
Type: TC
Location: 65823 - 66749 (-)
Gene ID: MGYG000003355_36_43
Type: STP
Location: 66821 - 68173 (-)
Type: STP
Location: 66821 - 68173 (-)
Gene ID: MGYG000003355_36_44
Type: TC
Location: 68265 - 70019 (-)
Type: TC
Location: 68265 - 70019 (-)
Gene ID: MGYG000003355_36_45
Type: pfam
Location: 70424 - 71848 (-)
Type: pfam
Location: 70424 - 71848 (-)
Gene ID: MGYG000003355_36_46
Type: CAZyme
Location: 71884 - 74277 (-)
Type: CAZyme
Location: 71884 - 74277 (-)
Gene ID: MGYG000003355_36_47
Type: pfam
Location: 74652 - 76319 (-)
Type: pfam
Location: 74652 - 76319 (-)
Gene ID: MGYG000003355_36_48
Type: CAZyme
Location: 76772 - 78337 (+)
Type: CAZyme
Location: 76772 - 78337 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.