Cluster: MGYG000003355_CGC61
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000003355
- CGC Family ID: CGCFAM_00462
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003355_184 | MGYG000003355_184_12 | 13068 | 13922 | - | 3.A.1.1.29 |
| TC | MGYG000003355_184 | MGYG000003355_184_13 | 13935 | 14885 | - | 3.A.1.1.10 |
| STP | MGYG000003355_184 | MGYG000003355_184_14 | 14999 | 16603 | - | SBP_bac_1 |
| TF | MGYG000003355_184 | MGYG000003355_184_15 | 17054 | 19345 | + | HTH_AraC |
| CAZyme | MGYG000003355_184 | MGYG000003355_184_16 | 19440 | 20159 | + | CE12 |
| CAZyme | MGYG000003355_184 | MGYG000003355_184_17 | 20394 | 21950 | - | GH28 |
| CAZyme | MGYG000003355_184 | MGYG000003355_184_18 | 22082 | 22969 | - | GH105 |
Gene ID: MGYG000003355_184_12
Type: TC
Location: 13068 - 13922 (-)
Type: TC
Location: 13068 - 13922 (-)
Gene ID: MGYG000003355_184_13
Type: TC
Location: 13935 - 14885 (-)
Type: TC
Location: 13935 - 14885 (-)
Gene ID: MGYG000003355_184_14
Type: STP
Location: 14999 - 16603 (-)
Type: STP
Location: 14999 - 16603 (-)
Gene ID: MGYG000003355_184_15
Type: TF
Location: 17054 - 19345 (+)
Type: TF
Location: 17054 - 19345 (+)
Gene ID: MGYG000003355_184_16
Type: CAZyme
Location: 19440 - 20159 (+)
Type: CAZyme
Location: 19440 - 20159 (+)
Gene ID: MGYG000003355_184_17
Type: CAZyme
Location: 20394 - 21950 (-)
Type: CAZyme
Location: 20394 - 21950 (-)
Gene ID: MGYG000003355_184_18
Type: CAZyme
Location: 22082 - 22969 (-)
Type: CAZyme
Location: 22082 - 22969 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.