Cluster: MGYG000003355_CGC29
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 6
- Substrate:
- Genome ID: MGYG000003355
- CGC Family ID: CGCFAM_00281
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003355_85 | MGYG000003355_85_75 | 80363 | 81517 | + | GT4 |
| CAZyme | MGYG000003355_85 | MGYG000003355_85_76 | 81518 | 82795 | + | GT4 |
| CAZyme | MGYG000003355_85 | MGYG000003355_85_77 | 82854 | 84020 | + | GT4 |
| TC | MGYG000003355_85 | MGYG000003355_85_78 | 84037 | 84813 | + | 3.A.1.103.4 |
| TC | MGYG000003355_85 | MGYG000003355_85_79 | 84814 | 86073 | + | 3.A.1.103.4 |
| pfam | MGYG000003355_85 | MGYG000003355_85_80 | 86087 | 87343 | + | MetW | Methyltransf_11 | Methyltransf_23 |
| CAZyme | MGYG000003355_85 | MGYG000003355_85_81 | 87356 | 88405 | + | GT4 |
| CAZyme | MGYG000003355_85 | MGYG000003355_85_82 | 88453 | 89763 | + | GT4 |
| pfam | MGYG000003355_85 | MGYG000003355_85_83 | 89792 | 91867 | + | DUF6311 |
| CAZyme | MGYG000003355_85 | MGYG000003355_85_84 | 91907 | 92527 | + | GT2 |
Gene ID: MGYG000003355_85_75
Type: CAZyme
Location: 80363 - 81517 (+)
Type: CAZyme
Location: 80363 - 81517 (+)
Gene ID: MGYG000003355_85_76
Type: CAZyme
Location: 81518 - 82795 (+)
Type: CAZyme
Location: 81518 - 82795 (+)
Gene ID: MGYG000003355_85_77
Type: CAZyme
Location: 82854 - 84020 (+)
Type: CAZyme
Location: 82854 - 84020 (+)
Gene ID: MGYG000003355_85_78
Type: TC
Location: 84037 - 84813 (+)
Type: TC
Location: 84037 - 84813 (+)
Gene ID: MGYG000003355_85_79
Type: TC
Location: 84814 - 86073 (+)
Type: TC
Location: 84814 - 86073 (+)
Gene ID: MGYG000003355_85_80
Type: pfam
Location: 86087 - 87343 (+)
Type: pfam
Location: 86087 - 87343 (+)
Gene ID: MGYG000003355_85_81
Type: CAZyme
Location: 87356 - 88405 (+)
Type: CAZyme
Location: 87356 - 88405 (+)
Gene ID: MGYG000003355_85_82
Type: CAZyme
Location: 88453 - 89763 (+)
Type: CAZyme
Location: 88453 - 89763 (+)
Gene ID: MGYG000003355_85_83
Type: pfam
Location: 89792 - 91867 (+)
Type: pfam
Location: 89792 - 91867 (+)
Gene ID: MGYG000003355_85_84
Type: CAZyme
Location: 91907 - 92527 (+)
Type: CAZyme
Location: 91907 - 92527 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.