Genome Details
Selected Rep_genome_ID: MGYG000003119
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Capnocytophaga
Species
Capnocytophaga ochracea
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| MGYG000003119 | 2,451,559 | 96.67% | 0% | US | North America | UHGG |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| MGYG000003119_CGC25 | CGCFAM_00001 | Yes | 5 | 3 | pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan |
| MGYG000003119_CGC12 | CGCFAM_00002 | Yes | 6 | 3 | |
| MGYG000003119_CGC6 | CGCFAM_00025 | Yes | 9 | 4 | pectin/alpha-glucan |
| MGYG000003119_CGC1 | CGCFAM_00072 | Yes | 3 | 1 | |
| MGYG000003119_CGC15 | CGCFAM_00079 | Yes | 5 | 2 | pectin |
| MGYG000003119_CGC17 | CGCFAM_00095 | Yes | 5 | 1 | |
| MGYG000003119_CGC14 | CGCFAM_00198 | Yes | 3 | 1 | |
| MGYG000003119_CGC23 | CGCFAM_00213 | Yes | 9 | 3 | beta-glucan |
| MGYG000003119_CGC31 | CGCFAM_00303 | Yes | 5 | 2 | |
| MGYG000003119_CGC13 | CGCFAM_00742 | Yes | 5 | 3 |
Top CAZyme Families