Cluster: MGYG000003119_CGC13
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000003119
- CGC Family ID: CGCFAM_00742
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003119_18 | MGYG000003119_18_27 | 28798 | 31038 | - | GH92 |
| CAZyme | MGYG000003119_18 | MGYG000003119_18_28 | 31082 | 32251 | - | GT4 |
| CAZyme | MGYG000003119_18 | MGYG000003119_18_29 | 32232 | 33062 | - | GT2 |
| pfam | MGYG000003119_18 | MGYG000003119_18_30 | 33063 | 34184 | - | EpsG |
| TC | MGYG000003119_18 | MGYG000003119_18_31 | 34181 | 35593 | - | 2.A.66.2.6 |
Gene ID: MGYG000003119_18_27
Type: CAZyme
Location: 28798 - 31038 (-)
Type: CAZyme
Location: 28798 - 31038 (-)
Gene ID: MGYG000003119_18_28
Type: CAZyme
Location: 31082 - 32251 (-)
Type: CAZyme
Location: 31082 - 32251 (-)
Gene ID: MGYG000003119_18_29
Type: CAZyme
Location: 32232 - 33062 (-)
Type: CAZyme
Location: 32232 - 33062 (-)
Gene ID: MGYG000003119_18_30
Type: pfam
Location: 33063 - 34184 (-)
Type: pfam
Location: 33063 - 34184 (-)
Gene ID: MGYG000003119_18_31
Type: TC
Location: 34181 - 35593 (-)
Type: TC
Location: 34181 - 35593 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Capnocytophaga
Species
Capnocytophaga ochracea
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.