Cluster: MGYG000003119_CGC15
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate: pectin
- Genome ID: MGYG000003119
- CGC Family ID: CGCFAM_00079
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003119_22 | MGYG000003119_22_8 | 11377 | 14346 | + | 1.B.14.6.1 |
| TC | MGYG000003119_22 | MGYG000003119_22_9 | 14360 | 15856 | + | 8.A.46.1.3 |
| CAZyme | MGYG000003119_22 | MGYG000003119_22_10 | 15856 | 17361 | + | GH30_3 |
| pfam | MGYG000003119_22 | MGYG000003119_22_11 | 17450 | 18181 | + | Lipase_GDSL_2 |
| CAZyme | MGYG000003119_22 | MGYG000003119_22_12 | 18647 | 20842 | + | GH3 |
Gene ID: MGYG000003119_22_8
Type: TC
Location: 11377 - 14346 (+)
Type: TC
Location: 11377 - 14346 (+)
Gene ID: MGYG000003119_22_9
Type: TC
Location: 14360 - 15856 (+)
Type: TC
Location: 14360 - 15856 (+)
Gene ID: MGYG000003119_22_10
Type: CAZyme
Location: 15856 - 17361 (+)
Type: CAZyme
Location: 15856 - 17361 (+)
Gene ID: MGYG000003119_22_11
Type: pfam
Location: 17450 - 18181 (+)
Type: pfam
Location: 17450 - 18181 (+)
Gene ID: MGYG000003119_22_12
Type: CAZyme
Location: 18647 - 20842 (+)
Type: CAZyme
Location: 18647 - 20842 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Capnocytophaga
Species
Capnocytophaga ochracea
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.