Genome Details
Selected Rep_genome_ID: HRGMv2_3993
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Alloprevotella
Species
Alloprevotella sp018383375
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_3993 | 2,268,619 | 92.81% | 2.087% | NA | Europe | HRGM |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_3993_CGC11 | CGCFAM_00025 | Yes | 12 | 5 | pectin/alpha-glucan |
| HRGMv2_3993_CGC5 | CGCFAM_00080 | Yes | 3 | 1 | |
| HRGMv2_3993_CGC17 | CGCFAM_00137 | Yes | 8 | 1 | |
| HRGMv2_3993_CGC13 | CGCFAM_02310 | Yes | 5 | 1 | |
| HRGMv2_3993_CGC14 | CGCFAM_05613 | Yes | 3 | 1 | |
| HRGMv2_3993_CGC6 | CGCFAM_05806 | Yes | 4 | 1 |
Top CAZyme Families