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Cluster: HRGMv2_3993_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3993_155 HRGMv2_3993_155_4 2952 4325 + 2.A.66.1.32
TC HRGMv2_3993_155 HRGMv2_3993_155_5 4350 4976 + 2.A.115.2.14
pfam HRGMv2_3993_155 HRGMv2_3993_155_6 4990 5526 + Metallophos_2
STP HRGMv2_3993_155 HRGMv2_3993_155_7 5769 6404 + TetR_N
CAZyme HRGMv2_3993_155 HRGMv2_3993_155_8 6812 7147 + GT2
NULL(UNKNOWN) HRGMv2_3993_155 HRGMv2_3993_155_9 7105 7611 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_3993_155 HRGMv2_3993_155_10 7657 8757 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3993_155 HRGMv2_3993_155_11 8813 9901 + 9.B.146.1.4
Gene ID: HRGMv2_3993_155_4
Type: TC
Location: 2952 - 4325 (+)
Gene ID: HRGMv2_3993_155_5
Type: TC
Location: 4350 - 4976 (+)
Gene ID: HRGMv2_3993_155_6
Type: pfam
Location: 4990 - 5526 (+)
Gene ID: HRGMv2_3993_155_7
Type: STP
Location: 5769 - 6404 (+)
Gene ID: HRGMv2_3993_155_8
Type: CAZyme
Location: 6812 - 7147 (+)
Gene ID: HRGMv2_3993_155_9
Type:
Location: 7105 - 7611 (+)
Gene ID: HRGMv2_3993_155_10
Type:
Location: 7657 - 8757 (+)
Gene ID: HRGMv2_3993_155_11
Type: TC
Location: 8813 - 9901 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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