Genome Details
Selected Rep_genome_ID: HRGMv2_3987
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Alloprevotella
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_3987 | 2,451,054 | 94.45% | 1.053% | NA | Europe | HRGM |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_3987_CGC19 | CGCFAM_00048 | Yes | 7 | 1 | |
| HRGMv2_3987_CGC18 | CGCFAM_00080 | Yes | 4 | 2 | |
| HRGMv2_3987_CGC9 | CGCFAM_00081 | Yes | 11 | 1 | |
| HRGMv2_3987_CGC20 | CGCFAM_00138 | Yes | 6 | 3 | |
| HRGMv2_3987_CGC6 | CGCFAM_00267 | Yes | 4 | 1 | |
| HRGMv2_3987_CGC27 | CGCFAM_00300 | Yes | 6 | 3 | |
| HRGMv2_3987_CGC7 | CGCFAM_00476 | Yes | 8 | 1 | |
| HRGMv2_3987_CGC16 | CGCFAM_00798 | Yes | 11 | 2 | |
| HRGMv2_3987_CGC26 | CGCFAM_00822 | Yes | 5 | 1 | host glycan |
| HRGMv2_3987_CGC14 | CGCFAM_02243 | Yes | 6 | 1 | |
| HRGMv2_3987_CGC8 | CGCFAM_05168 | Yes | 3 | 1 | |
| HRGMv2_3987_CGC24 | CGCFAM_10447 | Yes | 4 | 1 |
Top CAZyme Families