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Cluster: HRGMv2_3987_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3987_54 HRGMv2_3987_54_1 333 5060 + GH2
TC HRGMv2_3987_54 HRGMv2_3987_54_2 5498 5848 + 3.D.1.8.1
TC HRGMv2_3987_54 HRGMv2_3987_54_3 5845 6474 + 3.D.1.3.1
TC HRGMv2_3987_54 HRGMv2_3987_54_4 6471 8144 + 3.D.1.5.1
TC HRGMv2_3987_54 HRGMv2_3987_54_5 8235 9320 + 3.D.1.5.1
TC HRGMv2_3987_54 HRGMv2_3987_54_6 9337 9801 + 3.D.1.6.3
TC HRGMv2_3987_54 HRGMv2_3987_54_7 10016 10537 + 3.D.9.1.1
TC HRGMv2_3987_54 HRGMv2_3987_54_8 10555 10863 + 3.D.9.1.1
TC HRGMv2_3987_54 HRGMv2_3987_54_9 10886 12790 + 3.D.1.2.1
TC HRGMv2_3987_54 HRGMv2_3987_54_10 12813 14345 + 3.D.1.2.1
TC HRGMv2_3987_54 HRGMv2_3987_54_11 14366 15832 + 3.D.9.1.1
Gene ID: HRGMv2_3987_54_1
Type: CAZyme
Location: 333 - 5060 (+)
Gene ID: HRGMv2_3987_54_2
Type: TC
Location: 5498 - 5848 (+)
Gene ID: HRGMv2_3987_54_3
Type: TC
Location: 5845 - 6474 (+)
Gene ID: HRGMv2_3987_54_4
Type: TC
Location: 6471 - 8144 (+)
Gene ID: HRGMv2_3987_54_5
Type: TC
Location: 8235 - 9320 (+)
Gene ID: HRGMv2_3987_54_6
Type: TC
Location: 9337 - 9801 (+)
Gene ID: HRGMv2_3987_54_7
Type: TC
Location: 10016 - 10537 (+)
Gene ID: HRGMv2_3987_54_8
Type: TC
Location: 10555 - 10863 (+)
Gene ID: HRGMv2_3987_54_9
Type: TC
Location: 10886 - 12790 (+)
Gene ID: HRGMv2_3987_54_10
Type: TC
Location: 12813 - 14345 (+)
Gene ID: HRGMv2_3987_54_11
Type: TC
Location: 14366 - 15832 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Alloprevotella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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