Genome Details
Selected Rep_genome_ID: HRGMv2_3986
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Alloprevotella
Species
Alloprevotella sp000318095
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_3986 | 2,434,281 | 97.49% | 0.743% | Japan | Asia | HRGM |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_3986_CGC19 | CGCFAM_00135 | Yes | 4 | 1 | |
| HRGMv2_3986_CGC17 | CGCFAM_01379 | Yes | 4 | 1 | |
| HRGMv2_3986_CGC26 | CGCFAM_03155 | Yes | 4 | 2 | |
| HRGMv2_3986_CGC14 | CGCFAM_05088 | Yes | 3 | 1 | |
| HRGMv2_3986_CGC27 | CGCFAM_07067 | Yes | 6 | 2 | |
| HRGMv2_3986_CGC11 | CGCFAM_07068 | Yes | 8 | 1 | |
| HRGMv2_3986_CGC18 | CGCFAM_07069 | Yes | 5 | 1 | |
| HRGMv2_3986_CGC8 | CGCFAM_07070 | Yes | 21 | 11 | |
| HRGMv2_3986_CGC2 | CGCFAM_07071 | Yes | 7 | 2 | |
| HRGMv2_3986_CGC20 | CGCFAM_10471 | Yes | 7 | 2 |
Top CAZyme Families