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Cluster: HRGMv2_3986_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3986_9 HRGMv2_3986_9_16 14632 15426 + 3.A.1.125.1
pfam HRGMv2_3986_9 HRGMv2_3986_9_17 15439 16278 + S1_2 | S1_2 | CvfB_WH
NULL(UNKNOWN) HRGMv2_3986_9 HRGMv2_3986_9_18 16394 16846 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3986_9 HRGMv2_3986_9_19 17348 18673 - 2.A.40.7.6
pfam HRGMv2_3986_9 HRGMv2_3986_9_20 18899 19618 - DUF5020
TC HRGMv2_3986_9 HRGMv2_3986_9_21 19682 20938 - 2.A.40.1.4
NULL(UNKNOWN) HRGMv2_3986_9 HRGMv2_3986_9_22 21348 22289 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3986_9 HRGMv2_3986_9_23 23040 24416 + GH33
Gene ID: HRGMv2_3986_9_16
Type: TC
Location: 14632 - 15426 (+)
Gene ID: HRGMv2_3986_9_17
Type: pfam
Location: 15439 - 16278 (+)
Gene ID: HRGMv2_3986_9_18
Type:
Location: 16394 - 16846 (+)
Gene ID: HRGMv2_3986_9_19
Type: TC
Location: 17348 - 18673 (-)
Gene ID: HRGMv2_3986_9_20
Type: pfam
Location: 18899 - 19618 (-)
Gene ID: HRGMv2_3986_9_21
Type: TC
Location: 19682 - 20938 (-)
Gene ID: HRGMv2_3986_9_22
Type:
Location: 21348 - 22289 (-)
Gene ID: HRGMv2_3986_9_23
Type: CAZyme
Location: 23040 - 24416 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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