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Cluster: HRGMv2_3986_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3986_6 HRGMv2_3986_6_15 19330 20910 - 9.B.18.2.1
STP HRGMv2_3986_6 HRGMv2_3986_6_16 21135 22325 - Aminotran_1_2
TC HRGMv2_3986_6 HRGMv2_3986_6_17 22286 22861 - 9.B.18.1.2
NULL(UNKNOWN) HRGMv2_3986_6 HRGMv2_3986_6_18 22928 23539 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3986_6 HRGMv2_3986_6_19 23536 24699 - GT4
CAZyme HRGMv2_3986_6 HRGMv2_3986_6_20 24712 25800 - GT4
NULL(UNKNOWN) HRGMv2_3986_6 HRGMv2_3986_6_21 25826 26812 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3986_6 HRGMv2_3986_6_22 26794 27687 - GT2
pfam HRGMv2_3986_6 HRGMv2_3986_6_23 27715 28815 - EpsG
CAZyme HRGMv2_3986_6 HRGMv2_3986_6_24 28833 29546 - GT32
CAZyme HRGMv2_3986_6 HRGMv2_3986_6_25 29596 30801 - GT4
CAZyme HRGMv2_3986_6 HRGMv2_3986_6_26 30771 31826 - GT2
CAZyme HRGMv2_3986_6 HRGMv2_3986_6_27 31819 32772 - GT8
CAZyme HRGMv2_3986_6 HRGMv2_3986_6_28 32978 33964 - GT8
NULL(UNKNOWN) HRGMv2_3986_6 HRGMv2_3986_6_29 34012 35571 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3986_6 HRGMv2_3986_6_30 35816 36691 - GT2
CAZyme HRGMv2_3986_6 HRGMv2_3986_6_31 36688 37689 - GT2
CAZyme HRGMv2_3986_6 HRGMv2_3986_6_32 37710 38525 - GT32
TC HRGMv2_3986_6 HRGMv2_3986_6_33 38661 41078 - 8.A.3.3.4
pfam HRGMv2_3986_6 HRGMv2_3986_6_34 41091 41942 - Poly_export | SLBB_2
TC HRGMv2_3986_6 HRGMv2_3986_6_35 42636 44546 - 2.A.17.4.2
Gene ID: HRGMv2_3986_6_15
Type: TC
Location: 19330 - 20910 (-)
Gene ID: HRGMv2_3986_6_16
Type: STP
Location: 21135 - 22325 (-)
Gene ID: HRGMv2_3986_6_17
Type: TC
Location: 22286 - 22861 (-)
Gene ID: HRGMv2_3986_6_18
Type:
Location: 22928 - 23539 (-)
Gene ID: HRGMv2_3986_6_19
Type: CAZyme
Location: 23536 - 24699 (-)
Gene ID: HRGMv2_3986_6_20
Type: CAZyme
Location: 24712 - 25800 (-)
Gene ID: HRGMv2_3986_6_21
Type:
Location: 25826 - 26812 (-)
Gene ID: HRGMv2_3986_6_22
Type: CAZyme
Location: 26794 - 27687 (-)
Gene ID: HRGMv2_3986_6_23
Type: pfam
Location: 27715 - 28815 (-)
Gene ID: HRGMv2_3986_6_24
Type: CAZyme
Location: 28833 - 29546 (-)
Gene ID: HRGMv2_3986_6_25
Type: CAZyme
Location: 29596 - 30801 (-)
Gene ID: HRGMv2_3986_6_26
Type: CAZyme
Location: 30771 - 31826 (-)
Gene ID: HRGMv2_3986_6_27
Type: CAZyme
Location: 31819 - 32772 (-)
Gene ID: HRGMv2_3986_6_28
Type: CAZyme
Location: 32978 - 33964 (-)
Gene ID: HRGMv2_3986_6_29
Type:
Location: 34012 - 35571 (-)
Gene ID: HRGMv2_3986_6_30
Type: CAZyme
Location: 35816 - 36691 (-)
Gene ID: HRGMv2_3986_6_31
Type: CAZyme
Location: 36688 - 37689 (-)
Gene ID: HRGMv2_3986_6_32
Type: CAZyme
Location: 37710 - 38525 (-)
Gene ID: HRGMv2_3986_6_33
Type: TC
Location: 38661 - 41078 (-)
Gene ID: HRGMv2_3986_6_34
Type: pfam
Location: 41091 - 41942 (-)
Gene ID: HRGMv2_3986_6_35
Type: TC
Location: 42636 - 44546 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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