dbCAN Logo

PROTEIN: HRGMv2_3986_6_18

Loading protein structure...

Protein File & Metadata
Download PDB File
Source:
HRGMv2_3986_6_18.pdb
Genome ID:
HRGMv2_3986
Protein ID:
HRGMv2_3986_6_18

Loading protein structure information...

Detailed structural information will appear here after analysis...

Protein Sequence 
MTAILLFIKH   HFHWIWHIIE   ELNGLIFNWR   YPSLQSTTNH   ILKSESEKVP   LDLHWSIVEA 60
DDLPLLAQWL   QQLPKTSLQF   FHPHSFETEE   LKRLWKNPAF   LFIKVCKTND   PRNIVGYHFL 120
RGFFIGRAFH   GLLVDPSMGG   QGIGGQMWRI   AILISEALQL   DLYATISDLN   IASLKSVQKS 180
AFLKEQRQLA   NDYRLYKVLG   LRT 203
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-P46854-F1-model_v4 50 200 1 162 0.7101 0.8654
AF-Q58QH5-F1-model_v4 49 200 1 165 0.7017 0.8574
AF-Q2G0E2-F1-model_v4 51 201 1 168 0.7006 0.8684
AF-Q9HT95-F1-model_v4 39 200 17 186 0.6992 0.8542
AF-O25589-F1-model_v4 53 201 1 161 0.6957 0.8568
AF-Q9HYZ2-F1-model_v4 35 203 1 182 0.6928 0.81
AF-A0A044UZA8-F1-model_v4 24 203 1 180 0.6921 0.7823
AF-K0FC81-F1-model_v4 34 203 3 188 0.6902 0.8267
AF-Q8DQ42-F1-model_v4 28 203 2 189 0.6899 0.7924
AF-Q5FAI7-F1-model_v4 53 200 1 146 0.6888 0.823
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A1B1NKB7-F1-model_v4 GT0 25 201 129 305 0.5362 0.7438
AF-A0A126UXC5-F1-model_v4 GT0 47 203 124 291 0.5228 0.8013
AF-A0A348FVN1-F1-model_v4 GT0 22 203 325 505 0.5171 0.8339
AF-Q58462-F1-model_v4 GT0 5 200 161 484 0.5023 0.7399
AF-A0A7U4UBB0-F1-model_v4 GT0 47 201 160 309 0.4986 0.8169
UTW51656.1 GT0 26 201 163 495 0.4801 0.7862
D0IC30 GT0 23 201 176 502 0.4801 0.7754
AF-A0A127F1L0-F1-model_v4 GT0 22 201 147 483 0.4791 0.763
A0A7M2K0Y8 GT0 23 201 176 499 0.4775 0.771
AF-I6YV40-F1-model_v4 GT0 36 200 68 487 0.4752 0.8181
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
G8TF00 GT2 45 203 1 164 0.4711 0.8164
UTF94154.1 GT2 50 203 1 160 0.4623 0.8362
UCA58850.1 GT2 50 203 1 159 0.4606 0.8333
A0A3G2G848 GT2 50 203 1 159 0.4549 0.8267
A0A3R6KGL0 GT2 50 203 4 231 0.4252 0.8221
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
4u5y-assembly1.cif.gz_A 35 200 1 165 0.7466 0.8469
4nxy-assembly1.cif.gz_A 34 200 1 176 0.7256 0.8403
3igr-assembly1.cif.gz_A 36 200 1 178 0.6985 0.8329
2i79-assembly3.cif.gz_D 52 200 1 166 0.689 0.863
3eo4-assembly2.cif.gz_C 50 200 1 154 0.6887 0.8244
1z9u-assembly1.cif.gz_A 35 201 1 172 0.6876 0.7918
2i79-assembly1.cif.gz_E 52 200 1 168 0.6869 0.8628
8fv0-assembly1.cif.gz_C 51 203 1 166 0.6814 0.8317
2vi7-assembly2.cif.gz_C 50 200 1 164 0.6804 0.8379
6c37-assembly1.cif.gz_A 29 203 1 199 0.6799 0.8182
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-P46854-F1-model_v4 50 200 1 162 0.7101 0.8654
AF-O05517-F1-model_v4 50 201 2 150 0.7035 0.8385
AF-Q9HT95-F1-model_v4 39 200 17 186 0.6992 0.8542
AF-O31633-F1-model_v4 39 201 1 177 0.6931 0.8323
AF-P0A946-F1-model_v4 52 201 1 147 0.6869 0.8217
AF-P0A945-F1-model_v4 52 201 1 147 0.6865 0.8213
AF-P94482-F1-model_v4 35 203 1 170 0.6834 0.775
AF-O94340-F1-model_v4 50 201 4 162 0.6708 0.8196
AF-Q9USH6-F1-model_v4 3 203 2 204 0.6644 0.7084
AF-O34895-F1-model_v4 1 200 5 275 0.577 0.6864
Download Full SwissProt Results