PROTEIN: HRGMv2_3986_6_29
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Protein File & Metadata
Source:
HRGMv2_3986_6_29.pdb
Genome ID:
Protein ID:
HRGMv2_3986_6_29
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Detailed structural information will appear here after analysis...
Protein Sequence
MTETRLNNQE FNARRASKNA ALLIFRSVIT VIIGLITSRI IFNALGIEDY GINVVVAGIL 60 PAFTFVGGIL ATATSRFLTF EIGRGNKQLI RETFTATFYA HLALAIILVG ICEVGGIYLL 120 HHKLNIPEIR EEAAMIALQC AIVGVFFNIT QAPYNAILIA REQFKIYAYV SLTSALYGLL 180 SALLVKYTTF DKLIIYVILG FTNSVGSTLY LRYYCLRHYQ EARIYRRSRL TILKPILVYT 240 AWELFGNSCL AIYNQSRNYL VNVFFGVTYN SSTSVATTVS GSINGFTSPI QSAFSPSITK 300 QYAQGNLKEM QRAMKTTLRF SLIVYAMIAI PLAFNAELLF QLWLNSVPIA APDVLRWILL 360 ASFFGLMTSP LGLAIHATGR MQLISIIGGI YVLAQFFIIF ALYSYYHNYL HAFMVIAMGN 420 FFEVFQRAAI LKKQLPQLPL RPLFVVNAKV ISLVLFASIF PFILKDYITN PILYLVITTL 480 LYITILGSTA FLLLLEQHER DIIRQYVLQF SVKIRDFQK 519
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q0PAP8-F1-model_v4 | 4 | 438 | 1 | 434 | 0.8047 |
0.8928 |
| AF-P71616-F1-model_v4 | 1 | 438 | 1 | 435 | 0.7823 |
0.8699 |
| AF-O25454-F1-model_v4 | 30 | 438 | 1 | 412 | 0.7804 |
0.8933 |
| AF-Q9HUY9-F1-model_v4 | 6 | 438 | 7 | 441 | 0.78 |
0.8831 |
| AF-A0A0H3GGV5-F1-model_v4 | 10 | 440 | 4 | 436 | 0.7798 |
0.8728 |
| AF-V9H0I2-F1-model_v4 | 10 | 439 | 2 | 426 | 0.7787 |
0.8713 |
| AF-Q8ZKH8-F1-model_v4 | 10 | 438 | 5 | 435 | 0.7784 |
0.8778 |
| AF-Q8CWT9-F1-model_v4 | 7 | 508 | 1 | 469 | 0.7668 |
0.8264 |
| AF-Q8DPQ6-F1-model_v4 | 4 | 439 | 2 | 446 | 0.7623 |
0.8598 |
| AF-Q58119-F1-model_v4 | 5 | 439 | 5 | 447 | 0.7621 |
0.8586 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A160T089-F1-model_v4 | GT4 | 4 | 503 | 1 | 508 | 0.6583 |
0.7075 |
| AF-F2NKF2-F1-model_v4 | GT4 | 10 | 502 | 1 | 490 | 0.6332 |
0.8547 |
| AF-A0A160T2N7-F1-model_v4 | GT28 | 1 | 505 | 29 | 545 | 0.621 |
0.6786 |
| QJC17489.1 | GT2 | 1 | 515 | 214 | 849 | 0.601 |
0.7584 |
| WBL35586.1 | GT4 | 1 | 513 | 203 | 805 | 0.6007 |
0.7456 |
| A0A9W6NQN0 | GT2 | 4 | 437 | 15 | 478 | 0.5775 |
0.7886 |
| QNU38870.1 | GT4 | 11 | 505 | 1 | 475 | 0.5739 |
0.6849 |
| AF-D7BDH0-F1-model_v4 | GT4 | 8 | 501 | 1 | 480 | 0.5602 |
0.7651 |
| AF-A0A517Z2I8-F1-model_v4 | GT2 | 1 | 519 | 1 | 822 | 0.5576 |
0.7076 |
| AF-A0A6P1FQ34-F1-model_v4 | GT4 | 7 | 512 | 3 | 485 | 0.5428 |
0.7331 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A160T089 | GT4 | 4 | 503 | 1 | 508 | 0.6583 |
0.7075 |
| F2NKF2 | GT4 | 10 | 502 | 1 | 490 | 0.6332 |
0.8547 |
| A0A160T2N7 | GT28 | 1 | 505 | 29 | 545 | 0.621 |
0.6786 |
| QJC17489.1 | GT2 | 1 | 515 | 214 | 849 | 0.601 |
0.7584 |
| WBL35586.1 | GT4 | 1 | 513 | 203 | 805 | 0.6007 |
0.7456 |
| A0A9W6NQN0 | GT2 | 4 | 437 | 15 | 478 | 0.5775 |
0.7886 |
| QNU38870.1 | GT4 | 11 | 505 | 1 | 475 | 0.5739 |
0.6849 |
| A0A1S9M4N4 | GT2 | 11 | 440 | 277 | 694 | 0.5736 |
0.8161 |
| D7BDH0 | GT4 | 8 | 501 | 1 | 480 | 0.5602 |
0.7651 |
| A0A517Z2I8 | GT2 | 1 | 519 | 1 | 822 | 0.5576 |
0.7076 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 4z3p-assembly1.cif.gz_A | 5 | 438 | 4 | 424 | 0.7787 |
0.883 |
| 6fv8-assembly1.cif.gz_B | 4 | 439 | 4 | 436 | 0.7716 |
0.8594 |
| 6idr-assembly1.cif.gz_A | 6 | 439 | 1 | 434 | 0.7659 |
0.8537 |
| 6gwh-assembly1.cif.gz_A | 6 | 439 | 7 | 437 | 0.7652 |
0.8596 |
| 6ids-assembly1.cif.gz_A | 6 | 439 | 1 | 434 | 0.7648 |
0.8526 |
| 6z70-assembly1.cif.gz_A | 4 | 439 | 5 | 444 | 0.7645 |
0.8539 |
| 3vvo-assembly1.cif.gz_A | 6 | 439 | 7 | 443 | 0.7639 |
0.8599 |
| 7php-assembly1.cif.gz_A | 6 | 439 | 3 | 447 | 0.7624 |
0.8652 |
| 3w4t-assembly1.cif.gz_A | 6 | 439 | 7 | 444 | 0.7623 |
0.8571 |
| 6z71-assembly1.cif.gz_A | 5 | 439 | 1 | 419 | 0.7619 |
0.8582 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9PJB9-F1-model_v4 | 5 | 508 | 1 | 530 | 0.8277 |
0.8803 |
| AF-Q46378-F1-model_v4 | 5 | 508 | 1 | 530 | 0.8104 |
0.8642 |
| AF-Q9Z7H5-F1-model_v4 | 4 | 508 | 1 | 532 | 0.8088 |
0.8683 |
| AF-Q6HLG9-F1-model_v4 | 4 | 439 | 2 | 447 | 0.7912 |
0.8899 |
| AF-Q81G28-F1-model_v4 | 4 | 439 | 2 | 447 | 0.7898 |
0.8877 |
| AF-Q63DZ4-F1-model_v4 | 4 | 439 | 2 | 447 | 0.7894 |
0.8881 |
| AF-Q5KZL2-F1-model_v4 | 1 | 439 | 1 | 447 | 0.7817 |
0.8765 |
| AF-Q65IG9-F1-model_v4 | 4 | 439 | 2 | 447 | 0.7789 |
0.8764 |
| AF-O07940-F1-model_v4 | 1 | 438 | 9 | 451 | 0.7788 |
0.8746 |
| AF-O34474-F1-model_v4 | 3 | 438 | 9 | 457 | 0.7787 |
0.8855 |