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Genome Details

Selected Rep_genome_ID: HRGMv2_3980
Total Genomes Found: 2
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
Avimuribaculum
→
Species
Avimuribaculum sp944321705
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
HRGMv2_3980 2,542,172 98.86% 0% Japan Asia HRGM
Rep_115 2,285,373 90.2601% 1.09138% NA NA WIS
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
HRGMv2_3980_CGC29 CGCFAM_00006 Yes 6 3
HRGMv2_3980_CGC28 CGCFAM_00069 Yes 6 1
HRGMv2_3980_CGC3 CGCFAM_00104 Yes 6 4
HRGMv2_3980_CGC37 CGCFAM_00135 Yes 3 1
HRGMv2_3980_CGC12 CGCFAM_00175 Yes 5 2 alpha-glucan
HRGMv2_3980_CGC16 CGCFAM_00184 Yes 6 2
HRGMv2_3980_CGC4 CGCFAM_00288 Yes 4 1
HRGMv2_3980_CGC22 CGCFAM_00476 Yes 7 1
HRGMv2_3980_CGC24 CGCFAM_00551 Yes 4 1
HRGMv2_3980_CGC7 CGCFAM_00582 Yes 15 5 arabinogalactan
HRGMv2_3980_CGC19 CGCFAM_01169 Yes 4 1
HRGMv2_3980_CGC40 CGCFAM_01828 Yes 3 1
HRGMv2_3980_CGC38 CGCFAM_02324 Yes 7 2
HRGMv2_3980_CGC8 CGCFAM_02849 Yes 4 1
HRGMv2_3980_CGC36 CGCFAM_02935 Yes 3 1 pectin
HRGMv2_3980_CGC25 CGCFAM_03194 Yes 3 1
HRGMv2_3980_CGC5 CGCFAM_04103 Yes 8 4
HRGMv2_3980_CGC2 CGCFAM_04497 Yes 7 1
HRGMv2_3980_CGC23 CGCFAM_05492 Yes 3 1
HRGMv2_3980_CGC20 CGCFAM_05665 Yes 3 2
HRGMv2_3980_CGC21 CGCFAM_06254 Yes 3 1
HRGMv2_3980_CGC9 CGCFAM_06255 Yes 6 2
HRGMv2_3980_CGC26 CGCFAM_07382 Yes 6 2
HRGMv2_3980_CGC34 CGCFAM_09649 Yes 4 3
HRGMv2_3980_CGC1 CGCFAM_10504 Yes 4 2
Top CAZyme Families