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Cluster: HRGMv2_3980_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3980_9 HRGMv2_3980_9_14 14781 17177 + GT51
pfam HRGMv2_3980_9 HRGMv2_3980_9_15 17282 18016 - CpsB_CapC
NULL(UNKNOWN) HRGMv2_3980_9 HRGMv2_3980_9_16 18059 18169 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3980_9 HRGMv2_3980_9_17 18214 20046 + 3.B.1.1.6
pfam HRGMv2_3980_9 HRGMv2_3980_9_18 20285 20536 + Ribosomal_L31
CAZyme HRGMv2_3980_9 HRGMv2_3980_9_19 20789 22204 - GH57
CAZyme HRGMv2_3980_9 HRGMv2_3980_9_20 22279 23532 - GT4
CAZyme HRGMv2_3980_9 HRGMv2_3980_9_21 23569 25515 - GH133
Gene ID: HRGMv2_3980_9_14
Type: CAZyme
Location: 14781 - 17177 (+)
Gene ID: HRGMv2_3980_9_15
Type: pfam
Location: 17282 - 18016 (-)
Gene ID: HRGMv2_3980_9_16
Type:
Location: 18059 - 18169 (+)
Gene ID: HRGMv2_3980_9_17
Type: TC
Location: 18214 - 20046 (+)
Gene ID: HRGMv2_3980_9_18
Type: pfam
Location: 20285 - 20536 (+)
Gene ID: HRGMv2_3980_9_19
Type: CAZyme
Location: 20789 - 22204 (-)
Gene ID: HRGMv2_3980_9_20
Type: CAZyme
Location: 22279 - 23532 (-)
Gene ID: HRGMv2_3980_9_21
Type: CAZyme
Location: 23569 - 25515 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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