dbCAN Logo

Cluster: HRGMv2_3980_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3980_11 HRGMv2_3980_11_4 2841 4211 - 4.A.5.1.4
sulfatase HRGMv2_3980_11 HRGMv2_3980_11_5 4219 5451 - S1_27
sulfatase HRGMv2_3980_11 HRGMv2_3980_11_6 5480 6274 - S1_2
CAZyme HRGMv2_3980_11 HRGMv2_3980_11_7 6468 7751 + PL42
CAZyme HRGMv2_3980_11 HRGMv2_3980_11_8 7785 10106 + GH105 | GH154
pfam HRGMv2_3980_11 HRGMv2_3980_11_9 10311 11933 + PD40 | PD40 | PD40
TC HRGMv2_3980_11 HRGMv2_3980_11_10 12304 15660 + 1.B.14.6.1
pfam HRGMv2_3980_11 HRGMv2_3980_11_11 15690 17711 + SusD_RagB | SusD-like_3
pfam HRGMv2_3980_11 HRGMv2_3980_11_12 17819 18814 + Por_Secre_tail
CAZyme HRGMv2_3980_11 HRGMv2_3980_11_13 19184 22672 + GH128
pfam HRGMv2_3980_11 HRGMv2_3980_11_14 23315 26914 + FIVAR | FIVAR | FIVAR | FIVAR | FIVAR | FIVAR
NULL(UNKNOWN) HRGMv2_3980_11 HRGMv2_3980_11_15 27295 27477 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3980_11 HRGMv2_3980_11_16 27509 30298 + GH128
NULL(UNKNOWN) HRGMv2_3980_11 HRGMv2_3980_11_17 30332 33382 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3980_11 HRGMv2_3980_11_18 33496 35229 + GH43_24
Gene ID: HRGMv2_3980_11_4
Type: TC
Location: 2841 - 4211 (-)
Gene ID: HRGMv2_3980_11_5
Type: sulfatase
Location: 4219 - 5451 (-)
Gene ID: HRGMv2_3980_11_6
Type: sulfatase
Location: 5480 - 6274 (-)
Gene ID: HRGMv2_3980_11_7
Type: CAZyme
Location: 6468 - 7751 (+)
Gene ID: HRGMv2_3980_11_8
Type: CAZyme
Location: 7785 - 10106 (+)
Gene ID: HRGMv2_3980_11_9
Type: pfam
Location: 10311 - 11933 (+)
Gene ID: HRGMv2_3980_11_10
Type: TC
Location: 12304 - 15660 (+)
Gene ID: HRGMv2_3980_11_11
Type: pfam
Location: 15690 - 17711 (+)
Gene ID: HRGMv2_3980_11_12
Type: pfam
Location: 17819 - 18814 (+)
Gene ID: HRGMv2_3980_11_13
Type: CAZyme
Location: 19184 - 22672 (+)
Gene ID: HRGMv2_3980_11_14
Type: pfam
Location: 23315 - 26914 (+)
Gene ID: HRGMv2_3980_11_15
Type:
Location: 27295 - 27477 (+)
Gene ID: HRGMv2_3980_11_16
Type: CAZyme
Location: 27509 - 30298 (+)
Gene ID: HRGMv2_3980_11_17
Type:
Location: 30332 - 33382 (+)
Gene ID: HRGMv2_3980_11_18
Type: CAZyme
Location: 33496 - 35229 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List