Genome Details
Selected Rep_genome_ID: HRGMv2_3894
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola ilei
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_3894 | 3,683,663 | 98% | 0.199% | UK | Europe | HRGM |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| PUL0664_HRGMv2_3894_C0 | CGCFAM_04187 | Yes | 13 | 8 | arabinogalactan |
| HRGMv2_3894_CGC19 | CGCFAM_05306 | Yes | 6 | 2 | |
| HRGMv2_3894_CGC23 | CGCFAM_06011 | Yes | 5 | 1 | |
| HRGMv2_3894_CGC53 | CGCFAM_06097 | Yes | 3 | 1 | |
| HRGMv2_3894_CGC13 | CGCFAM_09595 | Yes | 7 | 1 | |
| HRGMv2_3894_CGC43 | CGCFAM_10496 | Yes | 8 | 1 | |
| HRGMv2_3894_CGC7 | CGCFAM_10497 | Yes | 4 | 2 |
Top CAZyme Families