Cluster: PUL0664_HRGMv2_3894_C0
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 8
- Substrate: arabinogalactan
- Genome ID: HRGMv2_3894
- CGC Family ID: CGCFAM_04187
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | PUL0664_HRGMv2_3894_C0 | HRGMv2_3894_2_145 | 183410 | 186334 | + | GH2 |
| NULL(UNKNOWN) | PUL0664_HRGMv2_3894_C0 | HRGMv2_3894_2_146 | 186402 | 187283 | + | NULL(UNKNOWN) |
| NULL(UNKNOWN) | PUL0664_HRGMv2_3894_C0 | HRGMv2_3894_2_147 | 187320 | 188420 | + | NULL(UNKNOWN) |
| CAZyme | PUL0664_HRGMv2_3894_C0 | HRGMv2_3894_2_148 | 188469 | 189473 | + | GH43 |
| CAZyme | PUL0664_HRGMv2_3894_C0 | HRGMv2_3894_2_149 | 189497 | 190870 | + | GH49 |
| CAZyme | PUL0664_HRGMv2_3894_C0 | HRGMv2_3894_2_150 | 190888 | 192945 | + | GH36 |
| sulfatase | PUL0664_HRGMv2_3894_C0 | HRGMv2_3894_2_151 | 193045 | 194424 | - | S1_14 |
| CAZyme | PUL0664_HRGMv2_3894_C0 | HRGMv2_3894_2_152 | 194540 | 196519 | - | GH43 |
| CAZyme | PUL0664_HRGMv2_3894_C0 | HRGMv2_3894_2_153 | 196537 | 197973 | - | GH27 |
| sulfatase | PUL0664_HRGMv2_3894_C0 | HRGMv2_3894_2_154 | 198067 | 199497 | - | S1_8 |
| CAZyme | PUL0664_HRGMv2_3894_C0 | HRGMv2_3894_2_155 | 199515 | 201347 | - | GH2 |
| CAZyme | PUL0664_HRGMv2_3894_C0 | HRGMv2_3894_2_156 | 201531 | 203012 | + | GH49 |
| TF | PUL0664_HRGMv2_3894_C0 | HRGMv2_3894_2_157 | 203267 | 207556 | + | HTH_AraC |
Gene ID: HRGMv2_3894_2_145
Type: CAZyme
Location: 183410 - 186334 (+)
Type: CAZyme
Location: 183410 - 186334 (+)
Gene ID: HRGMv2_3894_2_146
Type: null
Location: 186402 - 187283 (+)
Type: null
Location: 186402 - 187283 (+)
Gene ID: HRGMv2_3894_2_147
Type: null
Location: 187320 - 188420 (+)
Type: null
Location: 187320 - 188420 (+)
Gene ID: HRGMv2_3894_2_148
Type: CAZyme
Location: 188469 - 189473 (+)
Type: CAZyme
Location: 188469 - 189473 (+)
Gene ID: HRGMv2_3894_2_149
Type: CAZyme
Location: 189497 - 190870 (+)
Type: CAZyme
Location: 189497 - 190870 (+)
Gene ID: HRGMv2_3894_2_150
Type: CAZyme
Location: 190888 - 192945 (+)
Type: CAZyme
Location: 190888 - 192945 (+)
Gene ID: HRGMv2_3894_2_151
Type: sulfatase
Location: 193045 - 194424 (-)
Type: sulfatase
Location: 193045 - 194424 (-)
Gene ID: HRGMv2_3894_2_152
Type: CAZyme
Location: 194540 - 196519 (-)
Type: CAZyme
Location: 194540 - 196519 (-)
Gene ID: HRGMv2_3894_2_153
Type: CAZyme
Location: 196537 - 197973 (-)
Type: CAZyme
Location: 196537 - 197973 (-)
Gene ID: HRGMv2_3894_2_154
Type: sulfatase
Location: 198067 - 199497 (-)
Type: sulfatase
Location: 198067 - 199497 (-)
Gene ID: HRGMv2_3894_2_155
Type: CAZyme
Location: 199515 - 201347 (-)
Type: CAZyme
Location: 199515 - 201347 (-)
Gene ID: HRGMv2_3894_2_156
Type: CAZyme
Location: 201531 - 203012 (+)
Type: CAZyme
Location: 201531 - 203012 (+)
Gene ID: HRGMv2_3894_2_157
Type: TF
Location: 203267 - 207556 (+)
Type: TF
Location: 203267 - 207556 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola ilei
Gene Composition
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