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Cluster: HRGMv2_3894_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3894_4 HRGMv2_3894_4_60 77100 77870 + GH23
pfam HRGMv2_3894_4 HRGMv2_3894_4_61 77954 78529 - RNase_HII
TC HRGMv2_3894_4 HRGMv2_3894_4_62 78555 79001 + 2.A.124.1.2
TC HRGMv2_3894_4 HRGMv2_3894_4_63 78998 79600 + 2.A.124.1.2
STP HRGMv2_3894_4 HRGMv2_3894_4_64 79694 80911 - Aminotran_1_2
pfam HRGMv2_3894_4 HRGMv2_3894_4_65 80924 82273 - SUFBD_core | SufBD_N
TC HRGMv2_3894_4 HRGMv2_3894_4_66 82270 83022 - 3.A.1.5.3
Gene ID: HRGMv2_3894_4_60
Type: CAZyme
Location: 77100 - 77870 (+)
Gene ID: HRGMv2_3894_4_61
Type: pfam
Location: 77954 - 78529 (-)
Gene ID: HRGMv2_3894_4_62
Type: TC
Location: 78555 - 79001 (+)
Gene ID: HRGMv2_3894_4_63
Type: TC
Location: 78998 - 79600 (+)
Gene ID: HRGMv2_3894_4_64
Type: STP
Location: 79694 - 80911 (-)
Gene ID: HRGMv2_3894_4_65
Type: pfam
Location: 80924 - 82273 (-)
Gene ID: HRGMv2_3894_4_66
Type: TC
Location: 82270 - 83022 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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