Genome Details
Selected Rep_genome_ID: HRGMv2_3882
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes faecavium
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_3882 | 2,243,555 | 95.26% | 0.267% | UK | Europe | HRGM |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_3882_CGC6 | CGCFAM_00030 | Yes | 5 | 1 | |
| HRGMv2_3882_CGC17 | CGCFAM_00111 | Yes | 4 | 1 | alpha-glucan |
| HRGMv2_3882_CGC3 | CGCFAM_00697 | Yes | 4 | 1 | |
| HRGMv2_3882_CGC27 | CGCFAM_00715 | Yes | 5 | 1 | |
| HRGMv2_3882_CGC2 | CGCFAM_01541 | Yes | 13 | 5 | |
| HRGMv2_3882_CGC9 | CGCFAM_01681 | Yes | 7 | 1 | |
| HRGMv2_3882_CGC8 | CGCFAM_02057 | Yes | 3 | 1 | |
| HRGMv2_3882_CGC24 | CGCFAM_03696 | Yes | 6 | 1 | |
| HRGMv2_3882_CGC21 | CGCFAM_03990 | Yes | 4 | 1 | |
| HRGMv2_3882_CGC26 | CGCFAM_04860 | Yes | 5 | 2 | |
| HRGMv2_3882_CGC13 | CGCFAM_04872 | Yes | 3 | 1 | |
| HRGMv2_3882_CGC12 | CGCFAM_05587 | Yes | 3 | 1 | |
| HRGMv2_3882_CGC28 | CGCFAM_08887 | Yes | 4 | 1 | |
| HRGMv2_3882_CGC23 | CGCFAM_09674 | Yes | 3 | 1 |
Top CAZyme Families