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Cluster: HRGMv2_3882_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3882_12 HRGMv2_3882_12_18 15958 19101 - 2.A.6.3.6
TC HRGMv2_3882_12 HRGMv2_3882_12_19 19114 20142 - 2.A.6.3.7
TC HRGMv2_3882_12 HRGMv2_3882_12_20 20209 21522 - 1.B.17.2.10
STP HRGMv2_3882_12 HRGMv2_3882_12_21 21563 22189 - TetR_N
TC HRGMv2_3882_12 HRGMv2_3882_12_22 22342 24003 - 2.A.17.1.1
peptidase HRGMv2_3882_12 HRGMv2_3882_12_23 24357 25463 + S09.UNW
CAZyme HRGMv2_3882_12 HRGMv2_3882_12_24 25612 27648 + GH13_8
Gene ID: HRGMv2_3882_12_18
Type: TC
Location: 15958 - 19101 (-)
Gene ID: HRGMv2_3882_12_19
Type: TC
Location: 19114 - 20142 (-)
Gene ID: HRGMv2_3882_12_20
Type: TC
Location: 20209 - 21522 (-)
Gene ID: HRGMv2_3882_12_21
Type: STP
Location: 21563 - 22189 (-)
Gene ID: HRGMv2_3882_12_22
Type: TC
Location: 22342 - 24003 (-)
Gene ID: HRGMv2_3882_12_23
Type: peptidase
Location: 24357 - 25463 (+)
Gene ID: HRGMv2_3882_12_24
Type: CAZyme
Location: 25612 - 27648 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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