Genome Details
Selected Rep_genome_ID: HRGMv2_3870
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_3870 | 3,891,393 | 96.64% | 0.279% | UK | Europe | HRGM |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_3870_CGC58 | CGCFAM_03976 | Yes | 9 | 1 | |
| HRGMv2_3870_CGC29 | CGCFAM_04268 | Yes | 12 | 6 | |
| HRGMv2_3870_CGC56 | CGCFAM_04798 | Yes | 4 | 1 | |
| HRGMv2_3870_CGC51 | CGCFAM_04865 | Yes | 4 | 1 | |
| HRGMv2_3870_CGC26 | CGCFAM_05308 | Yes | 4 | 1 | |
| HRGMv2_3870_CGC43 | CGCFAM_05942 | Yes | 15 | 5 | |
| HRGMv2_3870_CGC42 | CGCFAM_05943 | Yes | 17 | 2 | |
| HRGMv2_3870_CGC21 | CGCFAM_06165 | Yes | 4 | 1 | |
| HRGMv2_3870_CGC19 | CGCFAM_06501 | Yes | 4 | 1 | |
| HRGMv2_3870_CGC46 | CGCFAM_09507 | Yes | 6 | 1 | |
| HRGMv2_3870_CGC60 | CGCFAM_09517 | Yes | 5 | 3 | |
| HRGMv2_3870_CGC52 | CGCFAM_10481 | Yes | 5 | 1 |
Top CAZyme Families