Genome Details
Selected Rep_genome_ID: HRGMv2_3158
Total Genomes Found: 2
Total Genomes Found: 2
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Pseudoscilispira
Species
Pseudoscilispira sp018369915
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_3158 | 2,084,470 | 99.74% | 1.006% | South Korea | Asia | HRGM |
| MGYG000002726 | 2,294,968 | 90.71% | 2.01% | Canada | North America | UHGG |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_3158_CGC2 | CGCFAM_00004 | Yes | 8 | 3 | alpha-glucan |
| HRGMv2_3158_CGC1 | CGCFAM_00015 | Yes | 3 | 1 | |
| HRGMv2_3158_CGC8 | CGCFAM_03457 | Yes | 4 | 1 | |
| HRGMv2_3158_CGC6 | CGCFAM_04351 | Yes | 4 | 1 |
Top CAZyme Families