Cluster: HRGMv2_3158_CGC1
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3158
- CGC Family ID: CGCFAM_00015
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3158_1 | HRGMv2_3158_1_15 | 10941 | 11996 | + | GT4 |
| pfam | HRGMv2_3158_1 | HRGMv2_3158_1_16 | 12072 | 13199 | + | PS_pyruv_trans |
| TC | HRGMv2_3158_1 | HRGMv2_3158_1_17 | 13272 | 15575 | + | 9.B.74.1.1 |
Gene ID: HRGMv2_3158_1_15
Type: CAZyme
Location: 10941 - 11996 (+)
Type: CAZyme
Location: 10941 - 11996 (+)
Gene ID: HRGMv2_3158_1_16
Type: pfam
Location: 12072 - 13199 (+)
Type: pfam
Location: 12072 - 13199 (+)
Gene ID: HRGMv2_3158_1_17
Type: TC
Location: 13272 - 15575 (+)
Type: TC
Location: 13272 - 15575 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Pseudoscilispira
Species
Pseudoscilispira sp018369915
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.