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Cluster: HRGMv2_3158_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3158_1 HRGMv2_3158_1_101 100412 101860 + 2.A.25.1.4
pfam HRGMv2_3158_1 HRGMv2_3158_1_102 101933 102817 - VCA0040-like
pfam HRGMv2_3158_1 HRGMv2_3158_1_103 102997 103314 - Sel1 | Sel1
CAZyme HRGMv2_3158_1 HRGMv2_3158_1_104 103520 105946 - GT35
CAZyme HRGMv2_3158_1 HRGMv2_3158_1_105 106183 107613 - GT5
pfam HRGMv2_3158_1 HRGMv2_3158_1_106 107791 108891 - NTP_transferase | Hexapep_GlmU
pfam HRGMv2_3158_1 HRGMv2_3158_1_107 108888 110105 - NTP_transferase | Hexapep_GlmU
CAZyme HRGMv2_3158_1 HRGMv2_3158_1_108 110148 112151 - CBM48 | GH13_9
Gene ID: HRGMv2_3158_1_101
Type: TC
Location: 100412 - 101860 (+)
Gene ID: HRGMv2_3158_1_102
Type: pfam
Location: 101933 - 102817 (-)
Gene ID: HRGMv2_3158_1_103
Type: pfam
Location: 102997 - 103314 (-)
Gene ID: HRGMv2_3158_1_104
Type: CAZyme
Location: 103520 - 105946 (-)
Gene ID: HRGMv2_3158_1_105
Type: CAZyme
Location: 106183 - 107613 (-)
Gene ID: HRGMv2_3158_1_106
Type: pfam
Location: 107791 - 108891 (-)
Gene ID: HRGMv2_3158_1_107
Type: pfam
Location: 108888 - 110105 (-)
Gene ID: HRGMv2_3158_1_108
Type: CAZyme
Location: 110148 - 112151 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_3158_1_103 vegetarian > vegan 1.50794 0.00289

🧭 Explore Read Mapping of CGC

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