Genome Details
Selected Rep_genome_ID: HRGMv2_3005
Total Genomes Found: 3
Total Genomes Found: 3
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UMGS1279
Species
UMGS1279 sp900761625
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_3005 | 2,329,092 | 96.64% | 1.454% | UK | Europe | HRGM |
| Rep_3581 | 2,515,465 | 92.4331% | 1.34228% | NA | NA | WIS |
| SW155_87 | 2,300,059 | 92.69% | 0.67% | NA | Africa | H3AfricaPhase2 |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_3005_CGC12 | CGCFAM_00132 | Yes | 4 | 1 | |
| HRGMv2_3005_CGC5 | CGCFAM_00153 | Yes | 9 | 1 | |
| HRGMv2_3005_CGC8 | CGCFAM_00616 | Yes | 4 | 1 | |
| HRGMv2_3005_CGC4 | CGCFAM_02057 | Yes | 4 | 1 | |
| HRGMv2_3005_CGC11 | CGCFAM_02390 | Yes | 4 | 2 | |
| HRGMv2_3005_CGC13 | CGCFAM_05964 | Yes | 3 | 1 |
Top CAZyme Families