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Cluster: HRGMv2_3005_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3005_25 HRGMv2_3005_25_2 249 4295 - CE17 | CE2
TC HRGMv2_3005_25 HRGMv2_3005_25_3 4574 5569 - 9.A.11.1.1
TC HRGMv2_3005_25 HRGMv2_3005_25_4 5569 6015 - 9.A.11.1.1
TC HRGMv2_3005_25 HRGMv2_3005_25_5 6095 6766 + 3.A.1.122.7
TC HRGMv2_3005_25 HRGMv2_3005_25_6 7086 7985 + 3.A.1.4.10
TC HRGMv2_3005_25 HRGMv2_3005_25_7 7999 9042 + 3.A.1.4.8
TC HRGMv2_3005_25 HRGMv2_3005_25_8 9039 9797 + 3.A.1.4.10
TC HRGMv2_3005_25 HRGMv2_3005_25_9 9809 10516 + 3.A.1.4.10
TC HRGMv2_3005_25 HRGMv2_3005_25_10 10539 11174 + 2.A.115.2.14
Gene ID: HRGMv2_3005_25_2
Type: CAZyme
Location: 249 - 4295 (-)
Gene ID: HRGMv2_3005_25_3
Type: TC
Location: 4574 - 5569 (-)
Gene ID: HRGMv2_3005_25_4
Type: TC
Location: 5569 - 6015 (-)
Gene ID: HRGMv2_3005_25_5
Type: TC
Location: 6095 - 6766 (+)
Gene ID: HRGMv2_3005_25_6
Type: TC
Location: 7086 - 7985 (+)
Gene ID: HRGMv2_3005_25_7
Type: TC
Location: 7999 - 9042 (+)
Gene ID: HRGMv2_3005_25_8
Type: TC
Location: 9039 - 9797 (+)
Gene ID: HRGMv2_3005_25_9
Type: TC
Location: 9809 - 10516 (+)
Gene ID: HRGMv2_3005_25_10
Type: TC
Location: 10539 - 11174 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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