Cluster: HRGMv2_3005_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3005
- CGC Family ID: CGCFAM_02057
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3005_15 | HRGMv2_3005_15_13 | 16541 | 17707 | + | 9.B.174.1.1 |
| TF | HRGMv2_3005_15 | HRGMv2_3005_15_14 | 17917 | 19467 | + | GerE |
| TF | HRGMv2_3005_15 | HRGMv2_3005_15_15 | 19551 | 20351 | - | HTH_AraC | HTH_AraC |
| CAZyme | HRGMv2_3005_15 | HRGMv2_3005_15_16 | 20472 | 22166 | + | GH2 |
Gene ID: HRGMv2_3005_15_13
Type: TC
Location: 16541 - 17707 (+)
Type: TC
Location: 16541 - 17707 (+)
Gene ID: HRGMv2_3005_15_14
Type: TF
Location: 17917 - 19467 (+)
Type: TF
Location: 17917 - 19467 (+)
Gene ID: HRGMv2_3005_15_15
Type: TF
Location: 19551 - 20351 (-)
Type: TF
Location: 19551 - 20351 (-)
Gene ID: HRGMv2_3005_15_16
Type: CAZyme
Location: 20472 - 22166 (+)
Type: CAZyme
Location: 20472 - 22166 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UMGS1279
Species
UMGS1279 sp900761625
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.