Cluster: HRGMv2_3005_CGC12
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3005
- CGC Family ID: CGCFAM_00132
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3005_82 | HRGMv2_3005_82_2 | 1395 | 2594 | + | GT4 |
| pfam | HRGMv2_3005_82 | HRGMv2_3005_82_3 | 2609 | 3658 | + | PS_pyruv_trans |
| pfam | HRGMv2_3005_82 | HRGMv2_3005_82_4 | 3655 | 5190 | + | Polysacc_synt | Polysacc_synt_3 |
| TC | HRGMv2_3005_82 | HRGMv2_3005_82_5 | 5466 | 6524 | + | 9.B.18.2.1 |
Gene ID: HRGMv2_3005_82_2
Type: CAZyme
Location: 1395 - 2594 (+)
Type: CAZyme
Location: 1395 - 2594 (+)
Gene ID: HRGMv2_3005_82_3
Type: pfam
Location: 2609 - 3658 (+)
Type: pfam
Location: 2609 - 3658 (+)
Gene ID: HRGMv2_3005_82_4
Type: pfam
Location: 3655 - 5190 (+)
Type: pfam
Location: 3655 - 5190 (+)
Gene ID: HRGMv2_3005_82_5
Type: TC
Location: 5466 - 6524 (+)
Type: TC
Location: 5466 - 6524 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UMGS1279
Species
UMGS1279 sp900761625
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.