Genome Details
Selected Rep_genome_ID: HRGMv2_2823
Total Genomes Found: 5
Total Genomes Found: 5
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Porcipelethomonas
Species
Porcipelethomonas sp900554975
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| CGMR077918 | 2,034,964 | 93.96% | 0% | China | Asia | CGMR |
| HRGMv2_2823 | 2,247,257 | 97.98% | 0% | UK | Europe | HRGM |
| MGYG000004471 | 1,997,651 | 98.66% | 1.85% | Israel | Asia | UHGG |
| REFINED_METABAT215_TOP10_CONTIGS_1500_ASSEMBLY_K77_MERGED__Hadza_PheChl_Fiber-Hadza-Nepal_A_14_1640.233 | 2,058,700 | 93.61% | 0.11% | NA | Africa | Hadza |
| Rep_3497 | 1,904,833 | 92.226% | 1.62192% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_2823_CGC14 | CGCFAM_00067 | Yes | 7 | 2 | galactan |
| HRGMv2_2823_CGC20 | CGCFAM_00089 | Yes | 4 | 1 | |
| HRGMv2_2823_CGC18 | CGCFAM_01097 | Yes | 4 | 2 | |
| HRGMv2_2823_CGC9 | CGCFAM_01298 | Yes | 8 | 1 | |
| HRGMv2_2823_CGC10 | CGCFAM_07875 | Yes | 4 | 1 | |
| HRGMv2_2823_CGC1 | CGCFAM_10191 | Yes | 5 | 1 |
Top CAZyme Families