Cluster: HRGMv2_2823_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2823
- CGC Family ID: CGCFAM_10191
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2823_1 | HRGMv2_2823_1_43 | 44557 | 48039 | - | PL1 | PL9_1 |
| TC | HRGMv2_2823_1 | HRGMv2_2823_1_44 | 48424 | 49695 | - | 2.A.49.9.2 |
| TF | HRGMv2_2823_1 | HRGMv2_2823_1_45 | 50000 | 51040 | + | 0043758 |
| pfam | HRGMv2_2823_1 | HRGMv2_2823_1_46 | 51033 | 51584 | + | GrpE |
| TC | HRGMv2_2823_1 | HRGMv2_2823_1_47 | 51636 | 53486 | + | 1.A.33.1.4 |
Gene ID: HRGMv2_2823_1_43
Type: CAZyme
Location: 44557 - 48039 (-)
Type: CAZyme
Location: 44557 - 48039 (-)
Gene ID: HRGMv2_2823_1_44
Type: TC
Location: 48424 - 49695 (-)
Type: TC
Location: 48424 - 49695 (-)
Gene ID: HRGMv2_2823_1_45
Type: TF
Location: 50000 - 51040 (+)
Type: TF
Location: 50000 - 51040 (+)
Gene ID: HRGMv2_2823_1_46
Type: pfam
Location: 51033 - 51584 (+)
Type: pfam
Location: 51033 - 51584 (+)
Gene ID: HRGMv2_2823_1_47
Type: TC
Location: 51636 - 53486 (+)
Type: TC
Location: 51636 - 53486 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Porcipelethomonas
Species
Porcipelethomonas sp900554975
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.