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Cluster: HRGMv2_2823_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2823_8 HRGMv2_2823_8_6 6301 7587 + 2.A.103.1.3
pfam HRGMv2_2823_8 HRGMv2_2823_8_7 7584 8927 + Transpeptidase
CAZyme HRGMv2_2823_8 HRGMv2_2823_8_8 9062 10900 + GH5_1
TC HRGMv2_2823_8 HRGMv2_2823_8_9 11016 11936 + 9.B.70.1.1
pfam HRGMv2_2823_8 HRGMv2_2823_8_10 11947 12447 + Spore_III_AB
TC HRGMv2_2823_8 HRGMv2_2823_8_11 12460 12657 + 9.B.70.1.1
TC HRGMv2_2823_8 HRGMv2_2823_8_12 12651 13043 + 9.B.70.1.1
TC HRGMv2_2823_8 HRGMv2_2823_8_13 13040 14149 + 9.B.70.1.1
Gene ID: HRGMv2_2823_8_6
Type: TC
Location: 6301 - 7587 (+)
Gene ID: HRGMv2_2823_8_7
Type: pfam
Location: 7584 - 8927 (+)
Gene ID: HRGMv2_2823_8_8
Type: CAZyme
Location: 9062 - 10900 (+)
Gene ID: HRGMv2_2823_8_9
Type: TC
Location: 11016 - 11936 (+)
Gene ID: HRGMv2_2823_8_10
Type: pfam
Location: 11947 - 12447 (+)
Gene ID: HRGMv2_2823_8_11
Type: TC
Location: 12460 - 12657 (+)
Gene ID: HRGMv2_2823_8_12
Type: TC
Location: 12651 - 13043 (+)
Gene ID: HRGMv2_2823_8_13
Type: TC
Location: 13040 - 14149 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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