Cluster: HRGMv2_2823_CGC20
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2823
- CGC Family ID: CGCFAM_00089
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2823_49 | HRGMv2_2823_49_4 | 3539 | 6199 | - | CBM4 | GH9 |
| pfam | HRGMv2_2823_49 | HRGMv2_2823_49_5 | 6196 | 8358 | - | S1 | Tex_N | HHH_3 | HHH_7 | YqgF | Tex_YqgF | HHH_9 | Tex_central_region | S1_RRP5 |
| pfam | HRGMv2_2823_49 | HRGMv2_2823_49_6 | 8477 | 9475 | - | NAD_Gly3P_dh_N | ApbA | NAD_binding_2 | F420_oxidored | NAD_Gly3P_dh_C | GPD_NAD_C_bact |
| TC | HRGMv2_2823_49 | HRGMv2_2823_49_7 | 9478 | 10155 | - | 9.B.31.1.2 |
Gene ID: HRGMv2_2823_49_4
Type: CAZyme
Location: 3539 - 6199 (-)
Type: CAZyme
Location: 3539 - 6199 (-)
Gene ID: HRGMv2_2823_49_5
Type: pfam
Location: 6196 - 8358 (-)
Type: pfam
Location: 6196 - 8358 (-)
Gene ID: HRGMv2_2823_49_6
Type: pfam
Location: 8477 - 9475 (-)
Type: pfam
Location: 8477 - 9475 (-)
Gene ID: HRGMv2_2823_49_7
Type: TC
Location: 9478 - 10155 (-)
Type: TC
Location: 9478 - 10155 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Porcipelethomonas
Species
Porcipelethomonas sp900554975
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.