Genome Details
Selected Rep_genome_ID: HRGMv2_2712
Total Genomes Found: 5
Total Genomes Found: 5
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
CAG-103
Species
CAG-103 sp934589185
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| CGMR028496 | 1,916,408 | 91.95% | 0.22% | China | Asia | CGMR |
| HRGMv2_2712 | 2,168,052 | 92.61% | 0% | NA | NA | HRGM |
| MGYG000000884 | 2,163,347 | 92.95% | 0% | Denmark | Europe | UHGG |
| Rep_3182 | 2,717,950 | 92.6174% | 0.671141% | NA | NA | WIS |
| SW009_104 | 2,049,136 | 91.95% | 0.24% | NA | Africa | H3AfricaPhase2 |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_2712_CGC10 | CGCFAM_00015 | Yes | 4 | 3 | |
| HRGMv2_2712_CGC9 | CGCFAM_00076 | Yes | 9 | 3 | |
| HRGMv2_2712_CGC4 | CGCFAM_01921 | Yes | 6 | 1 | |
| HRGMv2_2712_CGC2 | CGCFAM_02562 | Yes | 4 | 1 | |
| HRGMv2_2712_CGC11 | CGCFAM_03114 | Yes | 11 | 1 |
Top CAZyme Families