Cluster: HRGMv2_2712_CGC4
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2712
- CGC Family ID: CGCFAM_01921
- Continent: NA
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2712_1 | HRGMv2_2712_1_832 | 853634 | 854842 | - | GH3 |
| TC | HRGMv2_2712_1 | HRGMv2_2712_1_833 | 854983 | 856137 | + | 9.B.10.1.1 |
| pfam | HRGMv2_2712_1 | HRGMv2_2712_1_834 | 856130 | 857095 | + | cobW | DUF1980_C |
| TC | HRGMv2_2712_1 | HRGMv2_2712_1_835 | 857154 | 857972 | - | 3.A.1.34.1 |
| TC | HRGMv2_2712_1 | HRGMv2_2712_1_836 | 857965 | 858897 | - | 3.A.1.34.1 |
| TC | HRGMv2_2712_1 | HRGMv2_2712_1_837 | 858926 | 859969 | - | 3.A.1.34.1 |
Gene ID: HRGMv2_2712_1_832
Type: CAZyme
Location: 853634 - 854842 (-)
Type: CAZyme
Location: 853634 - 854842 (-)
Gene ID: HRGMv2_2712_1_833
Type: TC
Location: 854983 - 856137 (+)
Type: TC
Location: 854983 - 856137 (+)
Gene ID: HRGMv2_2712_1_834
Type: pfam
Location: 856130 - 857095 (+)
Type: pfam
Location: 856130 - 857095 (+)
Gene ID: HRGMv2_2712_1_835
Type: TC
Location: 857154 - 857972 (-)
Type: TC
Location: 857154 - 857972 (-)
Gene ID: HRGMv2_2712_1_836
Type: TC
Location: 857965 - 858897 (-)
Type: TC
Location: 857965 - 858897 (-)
Gene ID: HRGMv2_2712_1_837
Type: TC
Location: 858926 - 859969 (-)
Type: TC
Location: 858926 - 859969 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
CAG-103
Species
CAG-103 sp934589185
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.