dbCAN HGM

Cluster: HRGMv2_2712_CGC11

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
CAZyme	HRGMv2_2712_1	HRGMv2_2712_1_1523	1660995	1661798	-	GT8
STP	HRGMv2_2712_1	HRGMv2_2712_1_1524	1661873	1662427	-	Pribosyltran
TC	HRGMv2_2712_1	HRGMv2_2712_1_1525	1662868	1664319	+	2.A.22.5.3
TC	HRGMv2_2712_1	HRGMv2_2712_1_1526	1664584	1666062	-	9.B.160.1.10
NULL(UNKNOWN)	HRGMv2_2712_1	HRGMv2_2712_1_1527	1666259	1668130	-	NULL(UNKNOWN) [View Structural Homologs]
TC	HRGMv2_2712_1	HRGMv2_2712_1_1528	1668105	1668998	-	3.A.1.126.1
TF	HRGMv2_2712_1	HRGMv2_2712_1_1529	1668991	1669314	-	GntR
STP	HRGMv2_2712_1	HRGMv2_2712_1_1530	1669512	1671389	-	Pyr_redox_2
TC	HRGMv2_2712_1	HRGMv2_2712_1_1531	1671616	1672434	+	3.A.1.3.10
TC	HRGMv2_2712_1	HRGMv2_2712_1_1532	1672513	1673160	+	3.A.1.3.20
TC	HRGMv2_2712_1	HRGMv2_2712_1_1533	1673173	1673946	+	3.A.1.3.14

Gene ID: HRGMv2_2712_1_1523
Type: CAZyme
Location: 1660995 - 1661798 (-)

Gene ID: HRGMv2_2712_1_1524
Type: STP
Location: 1661873 - 1662427 (-)

Gene ID: HRGMv2_2712_1_1525
Type: TC
Location: 1662868 - 1664319 (+)

Gene ID: HRGMv2_2712_1_1526
Type: TC
Location: 1664584 - 1666062 (-)

Gene ID: HRGMv2_2712_1_1527
Type:
Location: 1666259 - 1668130 (-)

Gene ID: HRGMv2_2712_1_1528
Type: TC
Location: 1668105 - 1668998 (-)

Gene ID: HRGMv2_2712_1_1529
Type: TF
Location: 1668991 - 1669314 (-)

Gene ID: HRGMv2_2712_1_1530
Type: STP
Location: 1669512 - 1671389 (-)

Gene ID: HRGMv2_2712_1_1531
Type: TC
Location: 1671616 - 1672434 (+)

Gene ID: HRGMv2_2712_1_1532
Type: TC
Location: 1672513 - 1673160 (+)

Gene ID: HRGMv2_2712_1_1533
Type: TC
Location: 1673173 - 1673946 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.